Rhynchophorus ferrugineus (red palm weevil): 143202371
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Entry
143202371 CDS
T11283
Symbol
Hel25E
Name
(RefSeq) ATP-dependent RNA helicase 25E
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03013
Nucleocytoplasmic transport
rfg03015
mRNA surveillance pathway
rfg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
143202371 (Hel25E)
09122 Translation
03013 Nucleocytoplasmic transport
143202371 (Hel25E)
03015 mRNA surveillance pathway
143202371 (Hel25E)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfg03019
]
143202371 (Hel25E)
03041 Spliceosome [BR:
rfg03041
]
143202371 (Hel25E)
Enzymes [BR:
rfg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
143202371 (Hel25E)
Messenger RNA biogenesis [BR:
rfg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
143202371 (Hel25E)
Spliceosome [BR:
rfg03041
]
Complex C
Other components
EJC/TREX
143202371 (Hel25E)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
143202371 (Hel25E)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
143202371
NCBI-ProteinID:
XP_076269966
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MAEPEDLLDYEDEEPTEQTTTSETASEPKKGVKGSYASIHSSGFRDFLLKPEILRAIVDC
GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPTENVVYVLVMCHTR
ELAFQISKEYERFSKYMPNIKVGVFFGGMPIQKDEEVLKNNCPHIVVGTPGRILALVRSK
KLNLKHLKHFILDECDKMLELLDMRRDVQEIYRNTPHGKQVMMFSATLSKEIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCVAL
AQLLTEQNFPAIGIHRGMDQKERLSRYEQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITFVSEESDAKILNEVQDRFDVNITELPDEIDLSSY
IEGR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaccagaggatcttctggattatgaagacgaggagccaactgaacagaccaca
acatccgagaccgcttctgaacctaaaaaaggtgtaaaaggttcttatgcttctattcac
agttccggcttcagagacttcttactgaaaccagaaatactcagagctatcgttgactgt
ggctttgaacatccctcagaagttcaacatgaatgtataccacaggctgtattaggaatg
gatatattatgccaagccaaatctggtatgggaaaaactgcggtatttgttttggccact
ttacaacaattggaaccaacagaaaatgttgtttatgttcttgttatgtgccacactaga
gaattagcctttcaaattagcaaggaatatgaacggttcagcaaatacatgccaaatatt
aaagtcggtgttttctttggtggtatgcctattcaaaaggatgaagaagtgttgaagaat
aattgcccacatattgttgttggaacccctggacgtatactggctttggtcaggtcaaag
aaacttaacctcaaacatctgaaacattttattcttgatgaatgtgacaaaatgttggag
ttgttagatatgagacgtgatgtgcaagaaatctacagaaatacaccacacggcaagcaa
gtcatgatgttcagtgccacattgagtaaagaaattcgtccagtttgcaagaagtttatg
caagatcccatggaagtatatgttgatgatgaagctaagctaacacttcatggtttacaa
caacattatgttaaattgaaggaaaatgaaaaaaataaaaaactctttgaactgcttgat
gtattagaatttaaccaggtggttatctttgtaaaatctgtgcagagatgtgttgcactc
gcccagttattgactgaacaaaactttcccgctattgggattcacagaggtatggaccaa
aaagaaaggttgtcacgatatgaacaatttaaagactttcagaagaggatacttgtagca
acaaatttattcgggagaggaatggatattgaacgtgtcaatatagtttttaactatgat
atgcctgaagactctgacacttatttacacagagtagccagggctggtcgtttcggtact
aaaggattggctattacttttgtttctgaagagagtgatgcaaaaattttgaatgaagtt
caagacagatttgatgttaacattacggaactgcctgatgaaattgatttaagttcttat
attgaaggacgataa
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integrated database retrieval system
