Rhynchophorus ferrugineus (red palm weevil): 143203373
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Entry
143203373 CDS
T11283
Symbol
HDAC1
Name
(RefSeq) histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03082
ATP-dependent chromatin remodeling
rfg03083
Polycomb repressive complex
rfg04213
Longevity regulating pathway - multiple species
rfg04330
Notch signaling pathway
rfg04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
143203373 (HDAC1)
03083 Polycomb repressive complex
143203373 (HDAC1)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
143203373 (HDAC1)
04350 TGF-beta signaling pathway
143203373 (HDAC1)
09150 Organismal Systems
09149 Aging
04213 Longevity regulating pathway - multiple species
143203373 (HDAC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rfg03036
]
143203373 (HDAC1)
Enzymes [BR:
rfg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
143203373 (HDAC1)
Chromosome and associated proteins [BR:
rfg03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
143203373 (HDAC1)
HDAC complexes
Sin3A-HDAC complex
143203373 (HDAC1)
BRAF-HDAC complex
143203373 (HDAC1)
REST complex
143203373 (HDAC1)
SHIP complex
143203373 (HDAC1)
MiDAC complex
143203373 (HDAC1)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
143203373 (HDAC1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
143203373 (HDAC1)
Chromatin remodeling factors
NuRD complex
143203373 (HDAC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
143203373
NCBI-ProteinID:
XP_076271598
LinkDB
All DBs
Position
Unknown
AA seq
473 aa
AA seq
DB search
MATQPHSRKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT
AEEMTKFHSDDYIRFLRSIRPDNMAEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAA
AVKLNKQASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHG
DGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDEAYESI
FVPIISKVMETFQPSAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFMMVGG
GGYTIRNVSRAWTYETSVALGVEIANELPYNDYFEYFGPDFKLHISPSNMANQNTPEYLE
KIKTRLFENLRMLPHAPGVQVQAIPEDAINEESDSEDKVDKDERLPQKDLDKRIVPDNEF
SDSEDEGEGGRRDNRSYKGRKRPRLDKTENKEGEDKPKEEVKSDKAPVEQETR
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggctactcaaccccatagccgaaaaagagtttgctattattatgacagtgatatcgga
aactattattatggccaaggacatccgatgaaaccgcacaggatcaggatgacacacaat
ttgctcctcaactacggtctttacaggaaaatggagatttatcgaccgcacaaagccacc
gccgaagaaatgaccaaattccactcggatgactatattcgtttcctgagatcaattcgg
ccagataatatggctgagtataataagcaaatgcagcgtttcaatgttggagaagattgc
cctgtatttgacggattatatgagttctgccagttatctgctgggggttcagtagcagcg
gcggtcaaattaaacaaacaagcttcggaaatatgcatcaactggggcggcggcttgcac
cacgcgaaaaaatcggaggcttccggtttctgttacgtgaatgatatcgtgctcggtatt
ttggagctgttgaaatatcaccagcgcgtactctacattgatatcgatgtgcatcatgga
gatggtgttgaggaggctttctacaccacggacagagttatgactgtatcattccataag
tatggtgaatattttccaggtactggagatttgagggacattggtgctggtaaaggcaag
tattatgccgtcaatatacctctgagagatggaatggatgacgaggcctatgaaagtatt
tttgtaccgatcattagcaaagtcatggagactttccaaccaagtgctgtggtgttgcaa
tgcggggccgattcgctaacgggcgaccgactgggttgcttcaatctgacggtgaagggc
cacggcaagtgcgtggagttcgtgaaaaaatacaacctgcccttcatgatggtcggcggc
ggcggttacaccatccgcaatgtgtcgcgcgcctggacttacgagacgtccgtggctctc
ggcgtcgagatcgccaacgaactgccgtacaacgactacttcgagtacttcggaccggac
ttcaagctgcacatcagccctagcaacatggccaatcagaacactcccgagtatctggaa
aagatcaagaccaggctgtttgagaacttgcgcatgttgccgcatgcgcccggcgttcaa
gtgcaggccataccagaggacgccatcaacgaggagagcgacagcgaggacaaggtggac
aaggacgagaggctaccgcagaaggacctggacaaacggatcgtgccggataacgagttc
tcggatagcgaggacgagggcgagggcggcaggagagataacaggagttacaagggcagg
aagcgcccgcgactggacaagacggagaacaaagagggcgaggataagcccaaggaggag
gtcaaatcagacaaagcaccagtggagcaagagaccagatga
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integrated database retrieval system
