Rhynchophorus ferrugineus (red palm weevil): 143203653
Help
Entry
143203653 CDS
T11283
Symbol
smid
Name
(RefSeq) nuclear valosin-containing protein-like smid isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
143203653 (smid)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rfg03009
]
143203653 (smid)
Ribosome biogenesis [BR:
rfg03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
143203653 (smid)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_5
AAA_16
AAA_22
AAA_33
AAA_14
AAA_2
RNA_helicase
TIP49
AAA_28
Rad17
AAA_18
Vps4_C
Mg_chelatase
ABC_tran
nSTAND3
TsaE
NPHP3_N
NACHT
IstB_IS21
nSTAND_NTPase5
Cytidylate_kin2
AAA_17
AAA_19
AAA_3
Parvo_NS1
NB-ARC
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
143203653
NCBI-ProteinID:
XP_076272018
LinkDB
All DBs
Position
Unknown
AA seq
944 aa
AA seq
DB search
MGKVNNSTGVEIIPINEKSPAESHEKRLKMPYMSDPSIVPRVQKYLENNIDKTYVDINQM
ADELQKKYREYGKRKRSAFRASVKKAYSIVLQSYGLEDKESSDEIVSEESDQESGDEDKF
ANDSMNNQLVDMYQRQAAVKPKLDESELIDISSEDSEEEAAYNSFTKTNGASTSRPPNLR
TVIVPGYINNKPTLYDKRHSESAPQERGKKRKLEATIMPIKDVPSISKKKKIDGGAFEEP
RFSFKDIGGMDKTLEDVCKLLLHIRHPELYRKIGISPPRGFLLHGPPGCGKTLLAHAIAG
ELGVQLIKVAAPELVAGVSGESEERIRELFERACNSAPCVLFIDEVDAITPNRQNAQKEM
ERRIVAQLLSCLDDLNLAQNGDKVLVIGATNRPDAIDPALRRAGRFDREVCLGIPNERAR
EQILKVLTSNLTLSEDFDYQKIAKYTPGYVGADLLSLTREASMVAVNRVLSDIKERRRFQ
QALAMQQAAEEQRKAKELAAQYAEAQKKNHEATNEAAQQEIVVDSPRPVIDKDKEADTSS
DAVVVVDDAEESQSKPEATNAVCASSDSNLNGVLPPADPEPEIIVEEESLPPQEPMPVDE
IKTLTPLEELQIWLHDRVPISDDQLQNICVTMEDFGKALKSVQPSAKREGFATVPDTTWD
DIGSLKDIREELQMAILAPVRYSNQFEALGLNVPAGVLLCGPPGCGKTLLAKAIANEAGI
NFISVKGPELLNMYVGESERAVRVCFERARNSAPCVIFFDELDALCPKRSDSREGGATMR
VVNQMLTEMDGVEGRRGVFLLAASNRPDIVDPAVLRPGRLDKILYVGLPSREERVDILRA
ITKNGTRPKLDDDVDLVSIGTSEQTKGYTGADLAALVREASVLALKEFMMSGDSSVKVSS
RHFVKATEKIRPSVPEKDQKHYEKLKRLYTAVPEQAEVEEMEYS
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaagttaataacagtacaggtgtggaaataatacctatcaacgagaaatctccc
gcagagtcacatgaaaaacgcttaaaaatgccgtatatgtccgatccgtctatagtccca
cgagtacaaaagtacttggaaaataacattgacaaaacatatgttgacattaatcaaatg
gccgatgaacttcagaaaaaatatcgtgaatacggtaaaaggaaacgaagtgctttcagg
gcctcggtcaagaaagcctactcaatagtgttacagagttatggcttggaggataaagag
agctctgacgagattgtcagcgaggaaagcgatcaggagagcggagatgaggataagttt
gccaatgattcgatgaataatcagctggtggatatgtatcaaagacaagctgccgttaaa
cccaagctggacgagagcgagctgattgacattagtagtgaggattctgaggaggaggct
gcttacaatagtttcacgaaaaccaacggcgcgtcgacttccaggcctccgaacctcagg
acggtgattgttcctggatatatcaataacaaacccacgttgtacgacaagcgtcattcg
gaatccgcgccccaagagcgcggaaagaaacgcaaactggaagccaccataatgccgatc
aaagacgtccccagcatttcaaagaagaagaagatcgatggcggcgccttcgaggaaccg
aggttttccttcaaggacatcgggggcatggacaagaccctggaggacgtgtgcaaactg
ctgcttcacatacggcatccggagctataccggaagatcggtatatcgccgccccgaggc
ttcctattacacggacctccagggtgtggtaaaacacttctggcgcatgccatcgcgggg
gaactcggcgtgcagctgatcaaggtggccgcgcccgaattggtagctggcgtgtcgggt
gagagcgaggagaggatccgggagctattcgagagggcctgtaattcggcgccctgtgtc
cttttcatcgacgaggtggacgccatcacgccgaacaggcagaacgcgcagaaggagatg
gagagaaggatagtggcgcagttgttgagttgtttggacgatctgaacctggcgcagaat
ggcgacaaggtgctggtgatcggggcgaccaacaggccggatgccatcgatcctgcgcta
aggcgagcgggcagattcgacagggaggtatgtctgggcatcccgaatgaaagagcgagg
gagcaaatactaaaggtattaaccagcaatttaacactatctgaagacttcgattaccaa
aaaattgccaaatacacgccaggatacgtgggcgccgatttactgtcactcactagggag
gcttcgatggtagctgtgaacagggtactgagcgatatcaaggaaaggcgtcgatttcaa
caggcgctggcgatgcaacaagcggccgaggaacagaggaaagccaaggagttggcggct
cagtacgccgaagcccagaagaagaatcacgaggcaaccaatgaagcggctcaacaggag
atagtggtggacagtcctcggcctgtaatagacaaggacaaagaggcagatacatccagt
gatgctgtcgtcgttgtagatgacgcagaagagtcccaatcgaagccggaggcgacaaac
gccgtatgcgcctcgtcggattcgaatttgaacggagtactaccgccagctgatccggaa
cccgagataatagtcgaagaagaatcattaccgccacaagaaccgatgcccgtggacgag
atcaaaaccctgacgccgctggaagagttacagatatggctacacgacagagttcctatc
agcgacgaccagctacagaacatctgcgtcacgatggaagatttcggaaaggccttgaag
agtgtacagccgtcggcgaaacgggaaggcttcgccacggttcccgacaccacctgggac
gacatcggttcgttgaaggacatcagggaggaactacagatggcgatcttggcgcctgta
cgctactccaaccagttcgaagccctgggtctgaacgtacccgcgggagtgttgctgtgc
ggcccgcccggttgcggtaagactctcttggcgaaggccatcgccaacgaggctggtatc
aacttcatatccgttaagggacccgagctgcttaacatgtatgtaggtgagagcgaacgg
gcagtgagggtgtgcttcgagagagcgagaaactcggcgccctgcgtgatattcttcgac
gagctggacgccctctgtcctaaaaggtcagattctagagagggtggagcgacgatgcgt
gtcgtgaaccagatgcttacggagatggacggcgttgagggacgccgaggcgtgttcctc
ctggcggccagcaatcgaccggacatcgtagatccggccgtgttacgacctggacgtctg
gacaaaatcctctatgtgggactgccctcgcgtgaagagcgggtggatatcctacgagct
atcaccaaaaacggaaccagaccgaaactagacgatgacgtcgacctcgtcagcataggg
acatcggagcaaaccaaaggctatacgggcgccgacctggccgccctcgtccgggaagcc
tccgtcctcgccctaaaggagttcatgatgtctggcgactccagcgtgaaagtatccagc
cgacatttcgtcaaagccaccgagaaaatacgaccctctgtgccggaaaaggaccagaaa
cactacgagaaactaaaacggctgtacacggcggtaccggaacaagccgaggtcgaagag
atggagtactcctaa
DBGET
integrated database retrieval system
