Rhynchophorus ferrugineus (red palm weevil): 143204264
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Entry
143204264 CDS
T11283
Symbol
RPA1
Name
(RefSeq) replication protein A 70 isoform X1
KO
K07466
replication factor A1
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03030
DNA replication
rfg03420
Nucleotide excision repair
rfg03430
Mismatch repair
rfg03440
Homologous recombination
rfg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
143204264 (RPA1)
03420 Nucleotide excision repair
143204264 (RPA1)
03430 Mismatch repair
143204264 (RPA1)
03440 Homologous recombination
143204264 (RPA1)
03460 Fanconi anemia pathway
143204264 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfg03000
]
143204264 (RPA1)
03032 DNA replication proteins [BR:
rfg03032
]
143204264 (RPA1)
03400 DNA repair and recombination proteins [BR:
rfg03400
]
143204264 (RPA1)
Transcription factors [BR:
rfg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
143204264 (RPA1)
DNA replication proteins [BR:
rfg03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
143204264 (RPA1)
DNA repair and recombination proteins [BR:
rfg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
143204264 (RPA1)
MMR (mismatch excision repair)
143204264 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
143204264 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
143204264
NCBI-ProteinID:
XP_076272923
LinkDB
All DBs
Position
Unknown
AA seq
598 aa
AA seq
DB search
MSYKLSEECFRTIMAGGDFSEPIVQVLSLKKMTTSSGQDRFRVCLSDGKYMITVAMVTAS
VLSKVGEKGVPKFSVIQLTRYTTTVINNTPSKGDSRVLLMLDIKLIADGDDVHEIIGNPI
SYSEAITQEQRHEPPPAKIPKISGPSKGAESFDGNKSLVGHIVHPISSLNPYNNKWIIKA
RVMNKTPIKTWSNSKGEGKLFSMDLIDESGEIRLTGFRDLVDKFYDKVEIDKVYYISKCM
LKPANKQFSNLKNDYEMTMVNETVIEECQDDDMGAVPQINYNFVPVKQIMELDPKSIIDI
IGVVKGVGDLQVFQARSTGREVKKKEVMLVDQSNASVTLTLWGAEAENFDGSNNPVVVLK
GARISEFGGGKTLSTVSGTIMKLNPDLKESYRLKQWYDTEGNSVEATNVSARSGGSLGFN
TPWMCFKEVFDQQLGSSNATGDYYQVKGTVLMVKSENSCYKACPSPDCNKKVIDNSNGMY
RCEKCNREYESFKWRLLASMNVGDWSGNQWVSMFSSEAEKVLGVTAQEAGDLFEQDPSQF
NELVEKAHFKQFVLKCRAKTEVYNDEQRLKTVAVKVDPINYEEYNNHLINRIKQLTGA
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgagttataaattatcagaggagtgttttaggaccatcatggcggggggagacttttcg
gagcctattgtgcaggttttgagtttgaaaaaaatgaccacttcttcgggtcaagataga
tttagggtctgcctttccgacggcaagtatatgatcactgtggctatggtaacagcctca
gtgttgtccaaagttggtgaaaaaggtgtcccgaaattttccgtgatacaattaacaaga
tataccactacggttattaacaatacacctagtaaaggagacagccgggtgttactgatg
ctggacataaagctaatagcagatggtgatgatgttcatgaaattataggaaacccaatc
tcttactcagaagccataactcaagagcaaaggcatgaaccccctcccgcgaaaatcccc
aaaatatctggtccaagcaaaggggcggaatcctttgatggaaataagagtttagtgggt
catattgttcatcctatctccagcttaaatccatacaataacaagtggataatcaaggct
cgtgtaatgaacaagactcccattaagacatggtctaattctaaaggagaaggcaaactg
ttcagcatggatctgattgatgaaagtggtgaaatacgactaaccgggttcagagatctt
gttgataagttttatgataaagtagagattgataaagtttattatatatcaaagtgtatg
ttaaaaccggccaataagcagttcagcaatctgaagaatgattatgagatgaccatggtc
aatgagactgtgatagaagagtgtcaggatgatgatatgggtgcggtaccacaaattaac
tataatttcgttcctgttaaacagattatggagctagatcctaaaagtattatagatatc
attggtgtggtgaaaggagtgggtgatttgcaagttttccaagcgagatctacgggtcgt
gaggtgaagaaaaaggaagttatgctggttgatcagtccaatgcatcagtaacactaact
ctgtggggcgctgaagcggagaactttgacggctccaacaatcccgtcgttgtgctgaaa
ggggctcgaattagtgagtttggaggcggcaagactctctccacagtctcaggcaccata
atgaagttgaatcccgatctgaaggagtcttacaggctgaaacaatggtacgacacagag
gggaactcggtcgaggcgaccaatgtgagcgcgaggagtggagggtccctaggctttaac
acaccatggatgtgcttcaaggaggtgttcgatcagcagctgggttccagtaacgcaaca
ggtgattattaccaagtaaaaggtaccgttttgatggtgaagagtgaaaactcctgttat
aaagcatgccccagccccgactgcaataaaaaggtcatcgataactccaacgggatgtac
cgatgtgaaaagtgtaaccgagagtatgagagtttcaaatggagactcttagccagtatg
aacgtgggagactggagcggtaatcagtgggtgagcatgttcagttcggaagcggaaaaa
gtcctgggagtcactgcgcaagaagccggagacctattcgaacaggacccctcccaattc
aatgagctggtggaaaaggctcactttaaacagttcgtgctcaaatgtcgggccaagacc
gaggtttataatgatgaacaacgcctgaagaccgtggctgttaaagttgatccgattaac
tatgaggaatacaacaaccatttgataaaccgtataaaacagttaacgggtgcataa
DBGET
integrated database retrieval system
