Rhynchophorus ferrugineus (red palm weevil): 143205878
Help
Entry
143205878 CDS
T11283
Name
(RefSeq) chromatin assembly factor 1 p55 subunit-like
KO
K10752
histone-binding protein RBBP4
Organism
rfg Rhynchophorus ferrugineus (red palm weevil)
Pathway
rfg03082
ATP-dependent chromatin remodeling
rfg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rfg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
143205878
03083 Polycomb repressive complex
143205878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rfg03036
]
143205878
Chromosome and associated proteins [BR:
rfg03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
143205878
Histone modification proteins
HAT complexes
HATB complex
143205878
HDAC complexes
Sin3A-HDAC complex
143205878
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
143205878
PRC2.2
143205878
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
143205878
Heterochromatin formation proteins
Other heterochromatin formation proteins
143205878
Chromatin remodeling factors
NuRD complex
143205878
NuRF complex
143205878
NuRF complex (fruit fly)
143205878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
CAF1C_H4-bd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
EIF3I
WD_LRWD1
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RIG_1st
WD40_RFWD3
MIOS_WD40
Beta-prop_DCAF12
ANAPC4_WD40
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
143205878
NCBI-ProteinID:
XP_076275031
LinkDB
All DBs
Position
Unknown
AA seq
414 aa
AA seq
DB search
MATAGNKCEAETFDDALEEGIIKEEYKIWNSNAILLYDLVLAHMLEWPSLTAQWLPDVTR
PEGKDHSLHRLILGTHTSEGQNHLLIARVLVPNKDAQFDPSHYEIEKGEFCDFGSVSLKI
EIKINHEGEVNRARYMPQNPSVIATKTPSSDVLVFDYTKHTSKPDPSGECNPDLRLRGHQ
KEGYGLSWNPNRNGYLLSASHDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDVAWHL
LYESLFGSVADDQKFMFWDTRCNNTSKPSLTVDAHTAEVNCLSFSPYSEYILATGSSDKT
VALWDLRKLKLKLHSLESHKDEIFQVQWSPHNKTILASSGTDRRLHVWDLRKIGKEQSAE
DAEDGPPELLFSHRGHTANISDFSWNPNEPRVICSVSEDNIMQVWQMTECIYND
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgcaggaaataaatgtgaggccgaaacttttgatgatgcccttgaagaggga
attatcaaggaagaatacaaaatatggaatagcaatgccatattactttacgacttggta
ctggctcatatgttagagtggccttctctaacagcacaatggttaccagatgtcacacgt
cctgagggaaaggatcattcgttacatagattgattttaggcactcacactagcgaggga
caaaaccaccttttaattgctagagttttagtaccgaataaggatgcccaatttgatcca
tctcattatgaaattgaaaagggggaattttgtgatttcggttctgtttctttgaaaatc
gaaattaagataaatcatgaaggtgaagtcaatcgagccagatacatgcctcaaaatcct
tctgttattgcaaccaagactccgtcaagtgatgtgttagtatttgactataccaaacat
acttccaaacccgatcccagtggggaatgcaaccccgatttacgccttcgaggacaccag
aaggaaggctatggtttatcctggaatccaaaccgtaatgggtacttgctatctgccagt
catgatcacacgatttgcttatgggatattaatgccacaccaaaagaaaatagggttatt
gacgccaaaacaatcttcacaggtcatactgccgtggtagaggatgttgcatggcatcta
ttatatgagagtttattcggatctgttgcggatgaccaaaaatttatgttttgggatacc
agatgtaataataccagcaaaccttctcttactgtagatgctcatacagcagaagttaac
tgtttaagttttagtccatattcggagtacattttggctacaggatcttctgataaaacg
gtggcattgtgggatctgcgcaagctcaagttgaaattgcatagtttggagtcgcacaag
gacgaaattttccaagttcaatggtcaccccataacaaaacaatcttggcttcttcagga
actgatagaaggcttcatgtatgggatttgcgtaaaattgggaaagaacaaagtgccgag
gatgctgaagatgggccaccagaattgttgttcagtcatagaggtcacacagccaatatt
tctgacttcagttggaatccaaatgaacctcgggtgatctgctctgtatcagaggataat
ataatgcaagtgtggcaaatgactgagtgtatctataatgattaa
DBGET
integrated database retrieval system
