KEGG   Roseomonas fluvialis: Rmf_01080
Entry
Rmf_01080         CDS       T08992                                 
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
rfl  Roseomonas fluvialis
Pathway
rfl00300  Lysine biosynthesis
rfl00470  D-Amino acid metabolism
rfl01100  Metabolic pathways
rfl01110  Biosynthesis of secondary metabolites
rfl01120  Microbial metabolism in diverse environments
rfl01230  Biosynthesis of amino acids
Module
rfl_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rfl00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    Rmf_01080 (lysA)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Rmf_01080 (lysA)
Enzymes [BR:rfl01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     Rmf_01080 (lysA)
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: BDG70179
LinkDB
Position
109760..111100
AA seq 446 aa
MAAPLPLSDSSDPTFAELLALRPHLSLHAMDGLVMEEVPLARIAAEVGTPAWVYSAGALR
RRARALKDALSGAGLDATIHFAMKCNDNLSVLRVLAAEGLGADVVSEGELRIARAAGIPA
SAIVFSGVGKTVSEITHAIEQDIFQINAESAEEIDMISAIAAGLGRTARVALRVNPDVDA
KTHAKITTGKSENKFGVAISDAVAIYARMAALPGIEPIGIATHIGSQITAGMSAYRAAYA
RLAETIRELRARGLPVQRVDCGGGLGIPYRDEPAPSPEALAGAIKATLGDLGLPVMLEPG
RWIAGPAGVLLASVVLQKQGAAHRFVVVDAAMNDLVRPAMYEAWHGIVPVGAARAASPLS
AAEVVGPVCETGDTFARGRMLPVLAQGDAVAFLDAGAYGAVMSSTYNARPLAPEVLVDGA
RYAVVRERQTHDALLHGQRVPEWLAP
NT seq 1341 nt   +upstreamnt  +downstreamnt
atggccgcgccgctccccctgtccgacagttccgacccgaccttcgcagaattgctggcg
ttgcgcccgcatctgtccctgcacgccatggacgggctggtcatggaggaggtgccgctg
gcgcgcatcgcggccgaggtcggcacccccgcctgggtctattccgcgggtgcgctgcgt
cgccgcgcgcgtgcgctgaaggatgcgctgtccggtgcggggctggatgcgaccatccac
ttcgccatgaagtgtaacgacaacctgtcggtgctgcgtgtcctcgccgccgagggcctc
ggcgccgacgtggtcagcgagggcgagctccgcatcgctcgcgccgccggcatcccggcc
agcgccatcgtcttctccggcgtcggcaagaccgtgtccgagatcacccacgccatcgag
caggacatcttccagatcaacgccgagagcgcggaggagatcgacatgatctccgccatc
gccgcaggcctcggccgcacggcgcgcgtggcgctgcgcgtgaacccggacgtggatgcc
aagacccacgccaagatcaccaccggcaaaagcgagaacaagttcggcgttgcgatctcg
gacgcggtggcgatctacgcccgaatggcggcgctgccggggatcgagccgatcggcatc
gcgacccatatcggcagccagatcaccgccggcatgtcggcgtatcgcgccgcctatgcg
cgcctggccgagaccatccgcgaattgcgcgcccgcggcctgccggtgcagcgcgtggat
tgcggcggcggcctcggcattccgtatcgcgacgaacccgctccgagccccgaggcgctg
gccggtgcgatcaaggcgacgctgggggatctcggcctgccggtcatgctggaacccggg
cgctggatcgccgggccggcgggcgttctgctggcatcggtcgtgctgcagaagcagggc
gcggcgcaccggttcgtggtggtggatgcggcgatgaacgacctggtgcgccccgccatg
tacgaggcctggcacggcatcgtcccggtcggtgccgcgcgcgccgcatcgccgctttcg
gcggccgaggtggtcggcccggtctgcgagaccggtgacaccttcgcccgcggccggatg
ctaccggttctcgcgcagggcgacgcggtcgcgttcctggatgcgggcgcctatggcgcg
gtgatgtcgtcgacctacaacgcacggccgctggcaccggaggtgctggtggacggtgcg
cgctacgccgtggtgcgcgaacgccagactcatgacgccctgctgcacggccaacgcgtg
ccggagtggctggcgccatga

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