Roseomonas fluvialis: Rmf_01270
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Entry
Rmf_01270 CDS
T08992
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rfl
Roseomonas fluvialis
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rfl03016
]
Rmf_01270 (truA)
Enzymes [BR:
rfl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Rmf_01270 (truA)
Transfer RNA biogenesis [BR:
rfl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Rmf_01270 (truA)
Prokaryotic type
Rmf_01270 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BDG70198
LinkDB
All DBs
Position
complement(129106..129867)
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AA seq
253 aa
AA seq
DB search
MSAFALLVEYDGAPFVGWQRQSTGLSIQQVIEEAAAHLNGGEPPLATAAGRTDAGVHAEA
QVVQVEIGADLPADRVRDALNFHARPHPVVVRSAIAVAPGWSPRFDATGRAYRYRILNRR
ARPALDFGRVWHVQRPLDAGAMHRAAQGLLGRHDFSAYRAASCQAKSPLRTLDRLDVARL
ADEVVIVAEARSFLHHQVRNLVGTLAEVGMGRRPETWPRAVLDGRDRARAGQTAPPEGLT
LTAVRYDPPIDWV
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccttcgcattgctggtggaatacgacggcgcgcccttcgtgggctggcagcgg
caatccacgggcctgtcgatacagcaggtgatcgaagaagcggccgcgcacctgaatggc
ggggaaccgccgctggccaccgccgccggccgcaccgatgccggcgtgcatgcggaagcg
caggtcgtgcaggtcgagatcggcgccgacctgccggcggatcgtgtgcgcgacgcgctg
aacttccacgcccggccgcatccggtcgtggtgcggtcggccatcgcggtcgcgcccggc
tggtcgccgcgcttcgacgccaccgggcgcgcctatcgctaccgcatcctgaaccgccgc
gcgcgaccggcgctggatttcggccgcgtgtggcacgtgcagcggccgctcgatgccggg
gccatgcaccgcgcggcgcaggggctgctcgggcggcatgacttctcggcctatcgcgcg
gcgtcctgccaggcgaagtcgccgctgcgcacgctggaccggctggacgtggcacggctg
gcggatgaggtggtgatcgtggccgaggcgcggtccttcctgcaccaccaggtacgcaac
ctggtcggcacccttgccgaggtcggcatgggccgccgcccggaaacctggccgcgcgcg
gtgctggacgggcgcgaccgcgcccgcgccggccagaccgcaccgcccgaggggctgacg
ctgaccgccgtgcgctacgacccgccgatcgactgggtctga
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