KEGG   Roseomonas fluvialis: Rmf_01360
Entry
Rmf_01360         CDS       T08992                                 
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
rfl  Roseomonas fluvialis
Pathway
rfl02020  Two-component system
rfl02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:rfl00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Rmf_01360
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Rmf_01360
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rfl03021]
    Rmf_01360
Transcription machinery [BR:rfl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Rmf_01360
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: BDG70207
UniProt: A0ABM7XXP2
LinkDB
Position
complement(136728..138203)
AA seq 491 aa
MALGPRLDLRYAQQLVMTPQLRQAIKLLQSSNLEVTAFVEEELERNPLLERDDRVLPGPD
AGRATDPLPAAHEAPDAAAAASSDVLPSEAAAPLDAAWDNVYDAGTPHMGAGGRADFDDE
LSGIDAMAAPGKTLREHIGEQLRLTFRTPAERMIAGNLLALVDPAGRLAVPDATIAAALG
CDESLVTAVRRRMQRFDPVGMFCADLRECLAVQLQDRNRYDPAMAALLDNLDLLARRDLR
GLQRVCGVDAEDMAEMVAELKRLDPKPGASFDAPPAVTLVPDVLMRRGPADDWIIELNPE
TLPRVLINRGFHARAVVGAKSRDEKAWVAERFQTASWLVKSLEQRANTILKVAAEIVRRQ
DGFFRHGVAHLRPLILRNVAEEVGMHESTVSRVTSNKAIATPRGTFELKYFFTTAIAGTA
GGDSVSAEAVRHRIKSMVEAEGIDDILSDDAIVERLRAEGVDIARRTVAKYRDALRIPSS
VQRKREKAVPA
NT seq 1476 nt   +upstreamnt  +downstreamnt
atggcgctcggcccgcgcctcgacctgcgatacgcgcagcagctggtgatgacgccgcag
ctgcgccaggcgatcaagctgctgcaatcctccaacctggaagtgaccgccttcgtcgag
gaggaactcgagcgcaacccgctgctcgagcgcgacgaccgcgtgctgcccggcccggat
gccggccgcgccaccgacccgttgcccgcggcacacgaggcgcccgacgccgccgcggct
gcctcctcggacgtgctgccgagtgaagctgccgcaccgctcgatgccgcatgggacaat
gtctacgacgccggcacgccgcacatgggtgccggaggccgcgcggatttcgatgacgag
ctgtcgggcatcgatgccatggccgcgcccggcaagacgctgcgcgaacatatcggcgag
cagctacgcctgaccttccgcaccccggccgagcgcatgatcgcgggcaacctgctcgcg
ctggtcgaccccgcggggcggcttgcggtgccggatgccaccatcgccgcggcactcggc
tgcgacgaatcgctggtcaccgccgtgcgccggcgcatgcagcgcttcgatccggtgggc
atgttctgcgccgacctgcgcgaatgcctggcggtgcagctgcaggaccgcaaccgctac
gatccggccatggccgcgctgctcgacaacctcgacctgctcgcacggcgcgacctgcgc
gggctgcagcgcgtgtgcggcgtggacgccgaggacatggccgagatggtggccgagctg
aagcggctcgaccccaagccgggcgccagcttcgacgccccgccggccgtcaccctggtg
cccgacgtgctgatgcgccgcggcccggccgacgactggatcatcgagctgaacccagaa
accctgccccgcgtgctgatcaaccgcggcttccacgcccgcgcggtggtgggggcgaag
tcgcgcgacgagaaggcctgggtggccgaacgcttccagaccgcgtcgtggctggtgaag
tcgctcgaacaacgcgccaacaccatcctgaaggtggcggccgagatcgtgcgccggcag
gacggcttcttccggcacggggtggcgcatctgcgcccgctgatcctgcgcaacgtggcg
gaggaggtcggcatgcacgagagcaccgtgtcccgcgtgacgtccaacaaggcgatcgcg
acgccgcgcggcaccttcgagctcaagtatttcttcaccaccgccatcgcgggcaccgcg
ggaggcgattccgtgagcgcggaggccgtgcgccaccgcatcaagtcgatggtcgaggcg
gaggggatcgacgatatcctgtccgatgatgcgatcgtggagcgtcttcgcgcggaaggc
gtggacattgcccgccggaccgtggccaaataccgcgacgcgctgcgcataccatcatcg
gtgcagcgcaaacgggagaaggccgtcccggcctga

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