Roseomonas fluvialis: Rmf_01360
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Entry
Rmf_01360 CDS
T08992
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
rfl
Roseomonas fluvialis
Pathway
rfl02020
Two-component system
rfl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rmf_01360
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Rmf_01360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfl03021
]
Rmf_01360
Transcription machinery [BR:
rfl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Rmf_01360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
BDG70207
UniProt:
A0ABM7XXP2
LinkDB
All DBs
Position
complement(136728..138203)
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AA seq
491 aa
AA seq
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MALGPRLDLRYAQQLVMTPQLRQAIKLLQSSNLEVTAFVEEELERNPLLERDDRVLPGPD
AGRATDPLPAAHEAPDAAAAASSDVLPSEAAAPLDAAWDNVYDAGTPHMGAGGRADFDDE
LSGIDAMAAPGKTLREHIGEQLRLTFRTPAERMIAGNLLALVDPAGRLAVPDATIAAALG
CDESLVTAVRRRMQRFDPVGMFCADLRECLAVQLQDRNRYDPAMAALLDNLDLLARRDLR
GLQRVCGVDAEDMAEMVAELKRLDPKPGASFDAPPAVTLVPDVLMRRGPADDWIIELNPE
TLPRVLINRGFHARAVVGAKSRDEKAWVAERFQTASWLVKSLEQRANTILKVAAEIVRRQ
DGFFRHGVAHLRPLILRNVAEEVGMHESTVSRVTSNKAIATPRGTFELKYFFTTAIAGTA
GGDSVSAEAVRHRIKSMVEAEGIDDILSDDAIVERLRAEGVDIARRTVAKYRDALRIPSS
VQRKREKAVPA
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcggcccgcgcctcgacctgcgatacgcgcagcagctggtgatgacgccgcag
ctgcgccaggcgatcaagctgctgcaatcctccaacctggaagtgaccgccttcgtcgag
gaggaactcgagcgcaacccgctgctcgagcgcgacgaccgcgtgctgcccggcccggat
gccggccgcgccaccgacccgttgcccgcggcacacgaggcgcccgacgccgccgcggct
gcctcctcggacgtgctgccgagtgaagctgccgcaccgctcgatgccgcatgggacaat
gtctacgacgccggcacgccgcacatgggtgccggaggccgcgcggatttcgatgacgag
ctgtcgggcatcgatgccatggccgcgcccggcaagacgctgcgcgaacatatcggcgag
cagctacgcctgaccttccgcaccccggccgagcgcatgatcgcgggcaacctgctcgcg
ctggtcgaccccgcggggcggcttgcggtgccggatgccaccatcgccgcggcactcggc
tgcgacgaatcgctggtcaccgccgtgcgccggcgcatgcagcgcttcgatccggtgggc
atgttctgcgccgacctgcgcgaatgcctggcggtgcagctgcaggaccgcaaccgctac
gatccggccatggccgcgctgctcgacaacctcgacctgctcgcacggcgcgacctgcgc
gggctgcagcgcgtgtgcggcgtggacgccgaggacatggccgagatggtggccgagctg
aagcggctcgaccccaagccgggcgccagcttcgacgccccgccggccgtcaccctggtg
cccgacgtgctgatgcgccgcggcccggccgacgactggatcatcgagctgaacccagaa
accctgccccgcgtgctgatcaaccgcggcttccacgcccgcgcggtggtgggggcgaag
tcgcgcgacgagaaggcctgggtggccgaacgcttccagaccgcgtcgtggctggtgaag
tcgctcgaacaacgcgccaacaccatcctgaaggtggcggccgagatcgtgcgccggcag
gacggcttcttccggcacggggtggcgcatctgcgcccgctgatcctgcgcaacgtggcg
gaggaggtcggcatgcacgagagcaccgtgtcccgcgtgacgtccaacaaggcgatcgcg
acgccgcgcggcaccttcgagctcaagtatttcttcaccaccgccatcgcgggcaccgcg
ggaggcgattccgtgagcgcggaggccgtgcgccaccgcatcaagtcgatggtcgaggcg
gaggggatcgacgatatcctgtccgatgatgcgatcgtggagcgtcttcgcgcggaaggc
gtggacattgcccgccggaccgtggccaaataccgcgacgcgctgcgcataccatcatcg
gtgcagcgcaaacgggagaaggccgtcccggcctga
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