Roseomonas fluvialis: Rmf_01410
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Entry
Rmf_01410 CDS
T08992
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rfl
Roseomonas fluvialis
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rfl03016
]
Rmf_01410
Enzymes [BR:
rfl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Rmf_01410
Transfer RNA biogenesis [BR:
rfl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Rmf_01410
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BDG70212
LinkDB
All DBs
Position
complement(142035..142691)
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AA seq
218 aa
AA seq
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MGTTLFTHAGVTIRLHRNDLPDGLDFGRMVAIDTETMGLNPHRDRLCLVQLSSGDGSAHL
VQLIPESLGGQGFAAPNLKKLLADPAVTKLFHFARFDVAVLWHCLGVTTAPVVCTKVAAK
LVRTFTDRHGLKDLCRELLGVDLSKQQQTSDWGAPELTPEQLAYAASDVLHLHALWAKLE
ALLKREGRMDLAEACFRFLPARGKLDLLGYEDPDILSH
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
gtgggcaccaccctgttcacccatgccggcgtgacgatccgcctgcatcgcaacgacctg
ccagacgggctcgatttcggccgcatggtcgcgatcgataccgagaccatgggcctgaat
ccgcatcgcgaccggctctgcctggtgcagctttcctccggcgacggcagcgcccacctg
gtgcagctgatccccgagagcctcggcgggcagggcttcgccgcgcccaacctgaagaag
ctgctggccgacccggccgtgaccaagctgttccatttcgcccgcttcgacgtggcggtg
ctgtggcactgcctgggcgtgaccaccgcaccggtggtctgcaccaaggtcgcggccaag
ctggtgcgcaccttcacggaccggcacgggctgaaggatctgtgccgcgaattgctgggc
gtggacctgtccaagcagcagcagacctcggactggggtgcgccggaactgacgcccgag
cagctggcctatgccgcgtccgacgtgctgcacctgcatgcgttgtgggcaaagctcgaa
gcgctgctcaagcgcgaggggcggatggatctggccgaggcctgcttccgcttcctgccg
gcgcgcggcaagctcgacctgctgggctacgaggatcccgacatcctgagccactga
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