Roseomonas fluvialis: Rmf_04910
Help
Entry
Rmf_04910 CDS
T08992
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl03030
DNA replication
rfl03410
Base excision repair
rfl03420
Nucleotide excision repair
rfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rmf_04910
03410 Base excision repair
Rmf_04910
03420 Nucleotide excision repair
Rmf_04910
03440 Homologous recombination
Rmf_04910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfl03032
]
Rmf_04910
03400 DNA repair and recombination proteins [BR:
rfl03400
]
Rmf_04910
Enzymes [BR:
rfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rmf_04910
DNA replication proteins [BR:
rfl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Rmf_04910
DNA repair and recombination proteins [BR:
rfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Rmf_04910
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rmf_04910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BDG70562
LinkDB
All DBs
Position
complement(502356..505244)
Genome browser
AA seq
962 aa
AA seq
DB search
MATDENRAPEAGRPRGTAMSDAAAASEALPPVAPGERHLILVDGSGYIFRAYHALPPMTN
PQGVPVNAVYGFTTMLSQFLTRHAGTHIAVVFDAARINFRNEIYADYKAHRPDPPDDLIP
QFDLIREATDALGVCRAQLEGFEADDLIAAYAKAYLEEGPGQVTIVSSDKDLMQLVRPGV
QLLDPIKQKPIREPEVFEKFGVTPDKVVEVQALAGDSTDNVPGVPGIGIKTAAQLISEYG
DLESLLARATEIKQPKRREALVENAEKARISRRLVLLDENAPLPCPISEMVAKPPPDGRL
ESFLRAMGFRSLLARMGKLGEGNDPPRRGAPPAALRHAPAPGPVAPDLAVPFGPYEAVTT
EDALARWVAEATAAGVVAMDTETDSLDARRAKMVGFSLAVAPGRACYVPLRHGDASDMLA
QPAPAQVAPDRAFALLRPLLEDASVLKVFQHAKYDLDVLARGENGGFDAIAPIDDTMMIS
YAMEAGKHGHGMDELSVLHFNHQPIKFDEVTGTGRARIPFSQVPLDRATAYAAEDADVTL
RLWLLLRPRLREDGALATYEQVERRMVGVLRAMEGAGIKVDGAELARIGEDFSARLAVLE
KQIHALAGREFNVGSPKQLGEILFDEMKLSGGRKGKTGAYSTDAAVLEDLSAQGVELASR
VLEWRQLAKLKSTYVEALAAEIDPIDRRVHTSYGMAGTSTGRLSSNDPNLQNIPIRSEEG
MRIRRAFVAEPGHVLLAADYSQIELRLLAHLAEVPTLREAFEKGEDIHSRTAAEIFHLGP
GSVDKEARRRAKMINFGIIYGMSAFGLAQRLGIPPAEGRSIIDAYFAQYPGIRQEMERCK
EEARIHGFVRTPFGRKLWIPDIATKDPVRRAGAERAAINAPFQGGAAEIIKRAMVRLPRA
LRDAGLNARMLLQVHDELVFEVPEAEVVPTAALVKSIMESVATLRVPLSVEVGTGHSWAE
AH
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggccactgacgagaaccgcgcccccgaggccggccggccaaggggtaccgccatgagc
gacgccgccgccgcatccgaggcgctgcccccggtcgcgcccggcgagcgccacctgatc
ctggtcgatggctccggctacatcttccgcgcctatcacgcgctgccgcccatgacgaac
ccgcagggcgtgccggtgaatgccgtctatggcttcacgaccatgctctcgcagttcctc
acgcgccatgcgggcacgcatatcgccgtggtgttcgacgccgcgcgcatcaacttccgc
aacgagatctacgccgattacaaggcgcatcgcccggacccgccggacgacctgatcccg
caattcgacctgatccgggaggcgaccgatgcgctgggcgtctgccgcgcgcagctcgag
ggcttcgaggcggacgacctgatcgcggcctatgccaaggcgtatctcgaggaaggcccg
ggccaggtcaccatcgtctcctccgacaaggacctgatgcaactggtccgcccgggcgtg
cagctgctcgatccgatcaagcagaagccgatccgcgagccggaggtcttcgagaaattc
ggtgtcacgcccgacaaggtggtcgaggtgcaggcgctggccggcgattccaccgacaac
gtgccgggcgtgccgggcatcgggatcaagaccgcggcacagctcatcagcgaatacggc
gacctcgaatccctgctggcccgcgccaccgagatcaagcagcccaaacggcgcgaggcc
ttggtcgagaacgccgagaaggcgcgcatctcccgccgcctggtgctgctggacgagaac
gcgccgctgccctgcccgatatcggagatggtcgcgaagccgccgcccgatggcaggctg
gaatccttcctgcgcgccatgggcttccgctcgctgctcgcgcgcatgggcaagctcggc
gagggcaatgacccgccgcgccgcggcgcgccgcccgcggcacttcgccacgcgcccgcg
cctggcccggtcgcgcccgatctcgccgtgccctttggcccgtacgaagcggtgacgacc
gaggacgcgctcgcgcgctgggtggcggaggccaccgccgccggcgtggtggcgatggac
accgagaccgacagcctcgatgcgcggcgcgcgaagatggtcggcttctcgctggccgtg
gcccccgggcgcgcctgctacgtgccactgcgccatggcgatgcctccgacatgctggcg
cagcccgccccggcgcaggtagcgcccgaccgcgccttcgcgctgctgcgcccgctgctg
gaagacgcttcggtgctgaaggtgttccagcacgcgaaatacgacctcgatgtgctggcg
cgcggcgagaatggcggcttcgacgccatcgcgccgatcgacgacacgatgatgatctcc
tacgccatggaagccgggaagcacggccatggcatggacgaattgtccgtgctgcacttc
aaccaccagccgatcaagttcgacgaggtgaccggcaccggccgcgcgcgcatccccttc
agccaggtgccgctcgaccgcgccaccgcctatgccgccgaggatgccgacgtgacgctg
cggctatggctgctgctgcgcccgcgcctgcgcgaggacggcgcactggccacctacgaa
caggtggaacggcgcatggtcggcgtgctgcgcgcgatggaaggcgcgggcatcaaggtg
gacggcgccgagctcgcgcggatcggcgaggatttttccgcccgtctcgcggtgctcgag
aagcagatccacgcgctcgcagggcgcgagttcaacgtcggttctccgaagcagctcggc
gaaatcctgttcgacgaaatgaagctgtcgggcgggcgcaagggcaagaccggcgcctat
tccaccgatgcggcggtgctcgaggacctctccgcgcagggcgtggaactcgcctcacgc
gtgctggaatggcgccagctcgcgaagctgaaatccacctatgtcgaagcgctggcggcc
gagatcgacccgatcgaccgccgcgtgcacacctcctacggcatggcgggcaccagcacc
gggcgcctgtcgtccaacgacccgaacctgcagaacatcccgatccgctccgaggaaggc
atgcgcatccgccgcgccttcgtggccgagcccggacacgtgctgctggccgccgactac
agccagatcgaattgcgactgctggcccacctggccgaggtgcccacgctgcgcgaggcc
ttcgagaagggcgaggacatccattcgcgcaccgcggccgagatcttccacctcggcccc
ggcagcgtcgacaaggaagcccgccgccgcgccaagatgatcaacttcggcatcatctac
ggcatgtccgccttcggcctggcccagcgcctgggtatcccgccggccgagggacggtcc
atcatcgacgcctatttcgcgcaataccccggcatccggcaggaaatggaacgctgcaag
gaggaagcccgcatccacggcttcgtccgcacgcccttcggccgcaagctctggatcccg
gacatcgccaccaaggacccggtgcgccgcgccggggccgagcgcgccgccatcaacgcc
cccttccagggcggcgcggccgagatcatcaagcgcgccatggttcgcctgccgcgcgcc
ctgcgcgatgccggcctcaacgcgcgcatgctgctgcaggtgcatgacgaactggtcttc
gaggtgcccgaggccgaggtcgtacccaccgccgcgctggtgaagtccatcatggaatct
gtcgccaccctgcgcgtgccgctctcggtcgaggtcggcaccgggcattcctgggcggag
gcccactga
DBGET
integrated database retrieval system
