Roseomonas fluvialis: Rmf_05920
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Entry
Rmf_05920 CDS
T08992
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
rfl
Roseomonas fluvialis
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rfl02000
]
Rmf_05920
Transporters [BR:
rfl02000
]
Other transporters
Pores ion channels [TC:
1
]
Rmf_05920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
DUF2860
Motif
Other DBs
NCBI-ProteinID:
BDG70663
UniProt:
A0ABM7XYS7
LinkDB
All DBs
Position
complement(594632..596821)
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AA seq
729 aa
AA seq
DB search
MRLPSSRLRRVPFVFNTMFAPRIAAVLACGAVLPAAAQTPGPVAFPDGTVPPMIVTAPPL
LERDQVGELRGYQALTSSSATRTSTPLNQIPQSVTVIPRQLIEDQGDRTVADALRNAAGV
VPESPLFLNQNLNTFVRGFSAEIYRDGMQSYFDAGFAQSLLGIERIEVIRGPSSTLFGGG
LGGGHGGVVNFVSRLPGVANSYEMGVTFGPYGYANPYMDLNQVAGTTANGGVQVSARLQA
EYLSTRSYIENVLLSGYQVIPAVTVRTENTSVTVQAFTSERRANDYPGLPPELTGGASNF
GIDPYRNANGGNVPRTVTQRNGGRLFFEHRFDDVFTLRLAAQMASSNLEQPAQFPFGPPV
VGNTTYARFNGYLQQDLSQVTVLPTLEARFTTGPVRHTVLAGLEGDRVWDEGGIAFAFSD
IYDFAQPTDATFVRPQRAPPTRNVYTTLAAFLQEQATLWDRVHILAAARVTQLQISSTPD
AGGGFDSTTTRWTPRVGIAVDVLPWLTPYAGWGQGLRSPSGYAFLVNEPKPETSEQWEVG
VRARLGETLSASVAYFDIERTNVPVADPAFFGLARQTGQQRSRGVEVEMLWQPDQNFALL
ANYAYTNAEITQDNLLAPGTPLRAVPRNLARAWGIYRFRDIGPEWLQGLSIGGGVTVASG
APANDTDTVRTKGYTTFDAQIAYQTGPVRVALVGRNIGNATYTTPFNYFNNSVTPGAPTE
VFLTASLRF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgccgtccagccgcctccggagagtacccttcgtgttcaacaccatgttcgcg
ccgcgcatcgcggccgtccttgcatgcggagcagtgctgcccgccgctgcccagaccccc
ggccccgtggcctttccggacggcaccgtgccgccgatgatcgtcaccgcgccgccgctg
ctcgaacgcgaccaggtcggcgagttgcgcggctaccaggcgctgacatcgtcgagcgcc
acgcgcacctcgaccccgctgaaccagatcccgcaatcggtcacggtcatcccgcggcag
ctcatcgaggaccagggcgaccgcaccgtggcggatgcgctgcgcaacgccgccggcgtg
gtgcccgagagcccgctgttcctgaaccagaacctcaacaccttcgtgcgcggcttctcg
gccgagatctaccgcgacggcatgcagagctacttcgatgccggcttcgcgcagtcgctg
ctcggcatcgagcgcatcgaggtgatccgcggcccatcgagcacgctgttcggcggcggg
ctcggcggcgggcatggcggcgtcgtgaacttcgtctcgcgcctgccgggtgtcgcgaat
tcctacgagatgggcgtcaccttcggcccctatggctacgccaacccgtacatggacctg
aaccaggtggcgggcaccacggccaatggcggtgtgcaggtctcggcccggttgcaggcg
gaatacctgtccacgcgctcctacatcgagaacgtgctgctcagcggctaccaggtgatt
ccggcggtgacggtgcgcacggagaacacctccgtcacggtgcaggccttcacctccgaa
cgcagggccaacgactatccgggcctgccgccggagctcacgggcggggcgtcgaacttc
ggcatcgacccctaccgcaatgccaacggcggcaacgtcccgcgcaccgtcacgcagcgc
aacggcgggcggctgttcttcgagcaccgcttcgacgacgtgttcacgctgcgcctggcg
gcgcagatggcgtcgagcaacctcgagcagccggcacagttccccttcggcccgccggtg
gtcggcaacaccacctatgcgcgcttcaatggctacctgcagcaggacctgtcgcaggtg
acggtgctgcccacgctcgaggcgcgcttcaccaccggcccggtgcgccacaccgtgctg
gccggcctcgagggcgaccgggtgtgggacgagggcgggatcgcctttgccttctccgac
atctacgacttcgcgcagccgaccgacgccaccttcgtgcggccgcagcgcgcgccgccg
acgcgcaatgtctacaccacactggcggccttcctgcaggaacaggcgacgctgtgggac
cgcgtgcacatcctggccgcggcgcgcgtgacgcagttgcagatcagctccacacccgat
gccggcggcggcttcgattccaccaccacgcgctggacgccgcgggtgggcatcgcggtc
gatgtgctgccgtggctgacaccctatgccggctggggccaggggctgcgttcgccatcg
ggctacgccttcctcgtcaacgaaccgaagcctgagaccagcgagcaatgggaggtcggc
gtccgcgcccgactgggcgagacgctgtccgcctcggtcgcgtatttcgacatcgagcgc
accaacgtgccggtggcggaccccgccttcttcggcctggcgcgccagaccgggcagcag
cgctcgcgcggcgtcgaggtcgagatgctgtggcagcccgaccaaaacttcgccctgctg
gccaactacgcctacaccaatgccgagatcacgcaggacaacctgctggcccccggcacg
ccgttgcgcgcggtgccgcgcaacctggcgcgcgcctggggcatctaccgcttccgcgac
atcgggccggaatggctgcagggcctgtcgatcggcggcggcgtgacggtcgcctccggc
gcaccggccaacgacaccgacacggtgcgcaccaagggctacaccaccttcgacgcgcag
atcgcctaccagaccgggccggtccgcgtggcgctggtggggcgcaacatcggcaacgcg
acctacacgacgccgttcaactacttcaacaactcggtcacgccgggcgcgccgaccgag
gtgttcctcaccgccagcctgaggttctga
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