Roseomonas fluvialis: Rmf_06500
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Entry
Rmf_06500 CDS
T08992
Name
(GenBank) IclR family transcriptional regulator
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
rfl
Roseomonas fluvialis
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfl03000
]
Rmf_06500
Transcription factors [BR:
rfl03000
]
Prokaryotic type
Helix-turn-helix
IclR family
Rmf_06500
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_20
TrmB
HTH_24
Rrf2
HTH_Crp_2
HTH_23
HTH_9
HTH_47
Motif
Other DBs
NCBI-ProteinID:
BDG70721
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Position
655986..656810
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AA seq
274 aa
AA seq
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MPDRSPEKRQRGRPRIAVQPAESGVQSLDRAIALLDLVAGANGLSLTEVAEAAALPPSTC
YRILATLQRHGMVEFETGGQLWHVGVESFRIGSAFLRRRKIAERGRDNMQALVDRCGETA
NLAIADEDSVVFVSQVETHEPIRAFFRPGTRSPIHASGIGKAILAQWRPDRVARLVARGL
ARFTPQTLTDAAALAAELAETRARGWALDNEERNPGMRCVAAAIFNEYGEPIAGISVSGP
TVRLTPEVAAAFGPLVQAAAADVTRSIAGMPPQR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaccgcagccctgaaaaacgccagcgtggccgcccgcgcatcgccgtccagccg
gccgaatctggcgtacagtcgctcgaccgcgccatcgcgctgctcgacctggtcgccggc
gcgaacgggctgtcgttgaccgaggtggctgaggccgccgcgctgccgccctcgacctgc
taccgaatcctggccacgctgcaacgccacgggatggtggagttcgagaccggcggccag
ctctggcacgtgggcgtcgagagcttccgcatcggctccgccttcctgcgccggcgcaag
atcgccgagcgcggccgcgacaacatgcaggcgctggtcgatcgctgcggggagaccgcc
aacctcgccattgccgacgaggacagcgtggtgttcgtcagccaggtcgagacgcacgaa
cccatccgcgccttcttccgtcccggcacgcgcagcccgatccacgcatccgggatcggc
aaggcgatcctggcgcaatggcggcccgatcgcgtcgcgcgccttgtcgcgcgcgggctg
gcgcgcttcacgccgcagaccctgaccgacgccgcggcgctggcggcggaactcgccgag
acccgcgcgcgcggctgggcgctcgacaacgaggaacgcaatcccggcatgcgctgcgtc
gccgccgccatcttcaacgaatatggcgaacccatcgccggcatctcggtctcggggccc
accgtgcgcctcacgccggaggtcgcggcggccttcggaccgctggtgcaggccgcggca
gcggacgtgacgcgctcgatcgcgggcatgccgcctcagcgctga
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