Roseomonas fluvialis: Rmf_08090
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Entry
Rmf_08090 CDS
T08992
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl00541
Biosynthesis of various nucleotide sugars
rfl01100
Metabolic pathways
rfl01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Rmf_08090 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rfl01005
]
Rmf_08090 (kdsB)
Enzymes [BR:
rfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
Rmf_08090 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
rfl01005
]
Lipid A
Rmf_08090 (kdsB)
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
PA
DUF2064
Motif
Other DBs
NCBI-ProteinID:
BDG70880
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Position
complement(814966..815709)
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AA seq
247 aa
AA seq
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MRPIVVIPARMAATRLPGKPLAEIAGRPMIAHVLDRAREAGIGPLAVAAGEPEIVAAAEA
AGAQAVLVADDVPSGTDRVQRAMAVLDPEGRYDVVVNLQGDFPTIAPETLRAVLEPLADP
SVDIGTLVCPIADEEEANTPSFVKAACAFEGDKRVAPALYFSRLPIPWGDGPRWHHIGVY
AYRRAALDRFVSLPASPLELREKLEQLRALEAGMRISAARVDHGPFGVDTPHDLERARSL
LASRGHD
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
ttgcgccccatcgtcgtgattcccgcccgcatggccgccaccaggctaccgggcaagccg
ctggccgagatcgccgggcggccgatgatcgcccatgtgctggaccgggcgcgggaggcc
gggatcggcccgctggcggtcgccgcgggggaaccggagatcgtcgcggcagccgaggcc
gccggtgcgcaggcggtgctggtggccgacgacgtgccctcgggtaccgaccgcgtgcag
cgggcgatggcggtgctggaccccgagggccgctacgacgtggtggtgaacctgcagggg
gatttcccgaccatcgcgccggagacgctgcgcgccgtgctggaaccgctggccgacccg
tccgtggatatcggcacgctggtctgcccgatcgcggatgaggaggaggcgaacacgccg
tccttcgtgaaggccgcctgtgcgttcgagggcgacaagcgcgtcgcgccggcgctgtat
ttttcccgcctgccgatcccctggggggatgggccgcgctggcaccatatcggcgtctat
gcgtatcggcgcgcggcgctggaccggttcgtgagcctgccggcgagcccgctggagctg
cgcgagaagctcgagcagctgcgcgcgctggaagcgggcatgcggatttcggcggcgcgg
gtggaccacggccccttcggcgtcgatacgccgcacgaccttgaacgcgcccggagtctc
ttggcgtcgcgcggtcacgattga
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