Roseomonas fluvialis: Rmf_08650
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Entry
Rmf_08650 CDS
T08992
Name
(GenBank) hypothetical protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
rfl
Roseomonas fluvialis
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rfl01011
]
Rmf_08650
Enzymes [BR:
rfl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Rmf_08650
Peptidoglycan biosynthesis and degradation proteins [BR:
rfl01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Rmf_08650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
ChapFlgA
Motif
Other DBs
NCBI-ProteinID:
BDG70936
LinkDB
All DBs
Position
872185..872661
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AA seq
158 aa
AA seq
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MAFRRRPAFRAPALRAATCGAALGLSLMTMGCAQSAEGDAQPNAAAPTVEHRPAGAPQVG
VASYYARHFTGRRMANGRPFDPQSDTIAHRTLPFGTIVRVTNLHNGRSVTGVVQDRGPWT
RGRIVDLSPRIAHNLDMIRSGVARVEVVPVIEVAEARD
NT seq
477 nt
NT seq
+upstream
nt +downstream
nt
atggcgttccgccgtcgcccagccttccgcgccccagcgctgcgtgccgccacctgcggc
gccgcgctcggcctgtcgctgatgaccatgggctgcgcccaatccgccgagggcgatgcc
cagcccaatgccgcggcgcccaccgtcgagcatcgtcccgccggcgcgccgcaggtcggc
gtcgcatcctactacgcgcgccacttcaccggccggcgcatggccaatggccggcccttc
gacccgcagtcggacaccatcgcgcaccgcacgctgccgttcgggacgatcgtgcgcgtg
accaacctgcacaacggccgcagcgtgaccggcgtggtgcaggaccgcgggccctggacg
cgcgggcgcatcgtggatctcagcccgcgcattgcccacaacctcgacatgatccgcagc
ggcgtcgcgcgggtcgaggtggtgccggtcatcgaggtggccgaggcgcgggactga
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