Roseomonas fluvialis: Rmf_08700
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Entry
Rmf_08700 CDS
T08992
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Rmf_08700 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfl03400
]
Rmf_08700 (priA)
Enzymes [BR:
rfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rmf_08700 (priA)
DNA repair and recombination proteins [BR:
rfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Rmf_08700 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
Fucose_iso_N1
Zn_ribbon_12
AAA_16
AAA_30
Zn_ribbon_6
DUF7130
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
BDG70941
LinkDB
All DBs
Position
876918..879140
Genome browser
AA seq
740 aa
AA seq
DB search
MAGAANTRGPVTAQAVAATTRVRVLLPLPLGAAYDYRVPSGMAVAPGCFVVVPLGGREVA
GVVWDGAADPALQDARLRDIRGVLDAPPMTETLRRFVDWVAAYTLSPPGAVLRMAMSTPS
ALEARAPQAGWRSTAARPEGPRITPPRARVLALLADGAPRAGGEIAREAGVAPAVLRGMA
DAGLLEPALLPRPAHFTRPDAAHPGPVLGAEQDNAAAALRLAAGRRAFGVTLLTGVTGSG
KTEVYFEAIAATLAQGRQALVLLPEIALSTQWLDRFAARFGAAPALWHSELTSRTRRETW
RAVAEGEAPVLVGARSALFLPFPDLGLIVVDEEHETAFKQEEGVVYHARDMAVVRARLCS
AACVLASATPSLESSVNAQTGRYAALHLPARHGGAALPSVSLVDMRATPPERGRFISPPL
VQAVTDTLARGEQAMLFLNRRGYAPMTLCRSCGHRLRCPNCTAWLVEHRAARRLQCHHCG
HVEGIPEACPECGTPHSTVPIGPGVERVLEEASAIWPDARRLVMASDTIPGPAAAAAAAK
SIQDRAVDLVIGTQIVAKGWHFPHLTLVGVVDADLGLAGGDLRAAERTFQLLHQVAGRAG
REERPGRVLLQSFAPEHPVMQALVADDLEAFMAAEADARRPGHWPPFGRLAALIVSAEEE
RAADRIARDLGLAAPGGDGVEVLGPAPAPLAILRGRHRRRLLLKTRRDIAVQPLLEAWLA
KVSVPGNVRVQVDVDPVGFL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggctggcgcggcgaacacgcgcggtcccgtgacggcgcaggctgttgcggccacgaca
cgggtgcgggtgctgctgcccctgcccctgggcgcggcctatgactaccgcgtgccctcc
ggcatggcggtggcgccgggctgcttcgtcgtggtgcccctgggcggacgtgaagtcgct
ggcgtggtgtgggacggcgcggccgatcctgcgctgcaggatgctcgcctgcgcgacatc
cgcggcgttctcgacgccccgcccatgaccgaaacgctgcgccgattcgtggactgggtc
gcggcctatacgctcagcccgcccggcgcggtgctgcgcatggccatgagcacgccctcg
gctctcgaagcccgcgcgccacaagccggctggcgcagcaccgccgcccggcccgagggt
ccgcgcatcacaccgccccgcgcacgcgtcctggcgttgctggccgacggcgcgccgcgc
gcgggcggcgagatcgcgcgggaggccggcgtggcgcccgcggtgctgcgcggcatggcc
gatgcggggctgctggaacccgcgctgctgccccgccccgcgcacttcacgcggcccgac
gcggcgcaccccggcccggtgctgggtgcggagcaggacaatgccgcggccgcgctgcgc
ctggccgccggccggcgggccttcggcgtgacgctgctgaccggcgtgaccggctcgggc
aagaccgaggtatatttcgaagccatcgccgcgaccctggcgcagggccgccaggcgctg
gtgctgctgcccgagatcgcgctgtcgacgcaatggctcgaccgcttcgccgcgcgcttc
ggcgccgcccctgcgctgtggcattccgaactgacgtcgcgcacgcggcgcgagacctgg
cgcgcggtggccgagggcgaggccccggtactggtcggcgcacgctccgcgctgttcctg
cccttccccgaccttggcctgatcgtggtcgatgaggaacacgagaccgccttcaagcag
gaggagggcgtggtctaccacgcgcgcgacatggcggtggtgcgcgcgcggctgtgttcg
gccgcctgcgtcctggccagcgccacgccctcgctggaatcgagcgtgaatgcgcagacc
gggcgctacgccgcgctgcatctgcccgcgcggcacggcggcgcggcgctgcccagcgtc
tcgttggtggacatgcgcgcaacgccgcccgagcgcggccggttcatcagcccgccgctg
gtgcaggcggtgaccgacacgctggcgcgcggcgagcaggcgatgctgttcctcaaccgc
cgtggctacgcgcccatgacgctgtgccgcagctgcggccaccggctgcgctgccccaac
tgcaccgcctggctggtcgaacaccgcgctgcgcgccgcctgcaatgccaccattgcggc
catgtcgagggcattcccgaggcctgccccgaatgcggcacgccccattccaccgtgccg
atcggcccgggtgtcgagcgcgtgctcgaggaagcaagcgcgatctggcccgatgcgcgc
cggctggtcatggcgtcggacaccatccccggcccggcggcagcggcggcggcggcgaaa
tccatccaggaccgcgcggtggacctggtgatcggcacgcagatcgtcgccaaaggctgg
cacttcccgcacctgacgctggtcggcgtggtcgatgcggatctcggcctcgcgggcggg
gacctgcgcgcggcggagcgcaccttccagctgctgcaccaagtggccgggcgggccggg
cgggaggaacggcccgggcgcgtgctgctgcaatccttcgcgcccgaacacccggtgatg
caggcgctggtggccgacgacctcgaggccttcatggcggccgaggccgatgcgcgccgc
ccgggccactggccgcctttcgggcgcctggcggcgctgatcgtgagtgccgaggaggag
cgcgcggccgaccgcatcgcgcgcgacctcggcctggcggcgccggggggcgatggcgtg
gaggtgttggggccggcccccgcgccgctcgcgatcctgcgcgggcggcaccggcggcga
ctgctgctcaagacgcggcgcgacatcgcggtgcagccgctgctcgaagcctggctggcc
aaggtgagcgtcccgggcaatgtcagggtccaggtggatgtggacccggtgggcttcctg
tag
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integrated database retrieval system
