Roseomonas fluvialis: Rmf_10450
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Entry
Rmf_10450 CDS
T08992
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl00470
D-Amino acid metabolism
rfl00550
Peptidoglycan biosynthesis
rfl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Rmf_10450 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rmf_10450 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rfl01011
]
Rmf_10450 (murD)
Enzymes [BR:
rfl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Rmf_10450 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rfl01011
]
Precursor biosynthesis
Amino acid ligase
Rmf_10450 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
NAD_binding_2
MurD-like_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
BDG71116
LinkDB
All DBs
Position
complement(1057784..1059172)
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AA seq
462 aa
AA seq
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MNAPSPPFTPFLGARIAVVGLGRAGLPAALRLVEWGAEVEAWDDGEAQRAAATVAGLTLR
DPSEGRFRADALLLSPGIPHLLPRAHPAAEAARAAGAPVLCDVEFLYRAVLAAQSRARFV
GVTGTNGKSTTTALIHHVLTKAGRVAQVGGNLGPPALSLNILGSEGVYTLEMSSYMLERI
ATLRFNVAVMLNLSPDHLDRHGDMAGYAAAKARIFARQSHEDVAVLGQDDAITAAMAAGL
AARIVPISADTAQPGGIWAEGPVLRDDDGPIADLRDARALPGSHNAQNAAAAAAACRALG
VARADIAAGIATFAGLQHRLERVGEARGVVFVNDSKATNADSAARALASYDRVVWIAGGE
AKEGGIESLVPYFPRIAHAVLIGRDAAVLARTLAAHGIPHEVAGTLDAAVPAAAAAAFAG
AAPVVLLSPACASWDQFSGFDERGDSFRDLARSIAATHGRAA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaccctcgcctcccttcacccctttccttggcgcgcggatcgccgtggttggg
ctcggccgtgccgggttgccggcggcgctgcgcctggtcgaatggggtgcggaggtcgag
gcctgggacgatggcgaagcgcagcgcgccgccgccacggtggcggggctgacgctgcgc
gaccccagcgaggggcgctttcgtgccgatgcgctgctgctctcaccgggtatcccgcat
ctgctgccgcgcgcgcatcccgccgccgaagcagcgcgcgcggccggcgcgccggtcctg
tgcgacgtggagtttctctatcgcgccgtgctcgccgcgcagtcccgagcacgcttcgtc
ggcgtcaccgggaccaacgggaaatcgaccacgacggcgctgatccaccacgtcctcacg
aaggcgggacgcgtcgcgcaggtcggtggcaatctcggcccgccggccctgtctctcaac
atcttggggtcggagggggtctataccctcgaaatgtcgtcctacatgttggagcgaatc
gcgacgctgcgcttcaacgtggctgtcatgctgaacctcagcccagatcacctcgaccgt
catggcgacatggccggctatgccgctgcgaaggcgaggatcttcgcgcggcagtcgcat
gaggatgtcgcggtactgggccaggatgacgccatcacggccgcgatggccgcgggcctg
gccgcgcggatcgtgccgatctcggccgacacggcgcagcccggcggcatctgggccgaa
ggaccggtgctgcgcgacgacgatggcccgatcgctgacctgcgcgacgcgcgcgcactg
cctggcagccacaatgcgcagaatgcggctgcggcagcggcagcctgccgcgccctcggc
gtggcgcgcgccgacatcgccgcggggatcgcgaccttcgccggcctgcagcatcggctc
gagcgcgtgggcgaggcgcgcggcgtggtcttcgtgaacgacagcaaggcgaccaacgcc
gacagcgcagcgcgcgcgctcgcctcctacgaccgcgtcgtctggattgccggcggcgag
gcgaaggaaggcggcatcgagagcctcgtgccgtacttcccgcgcatcgcgcacgcggtc
ctcatcgggcgcgacgcggcggtgctggcgcgcacgctcgccgcgcatggcatcccgcat
gaggtcgccggcacgctcgatgccgctgtgccggccgcggcggcagcggcctttgcgggc
gcggcgccggtggtgctgctctcgccggcctgtgcgtcgtgggaccagttcagcggcttc
gatgagcgcggggacagcttccgcgacctggcacgatcgatcgccgccacgcatggaagg
gccgcctga
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