Roseomonas fluvialis: Rmf_11810
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Entry
Rmf_11810 CDS
T08992
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rfl
Roseomonas fluvialis
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfl03400
]
Rmf_11810
Enzymes [BR:
rfl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Rmf_11810
DNA repair and recombination proteins [BR:
rfl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Rmf_11810
Prokaryotic type
Rmf_11810
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BDG71252
LinkDB
All DBs
Position
complement(1212318..1213748)
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AA seq
476 aa
AA seq
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MPDSAILWFRQDLRLADHPALMAVAERPILPVYILEDGPWAPGGAARWWLHHSLAALGRD
LAERGAPLVLLRGDPRRLLPDLAAAVGATEIHAGRRTEPAGRRCDAETHAALQAAGTRLV
LHRTALLHEPHQVRTGSGTPYGVYTPFSRNVFGLLEGLAPALPAPARLSTAPGAPAGLSL
DELALLPRLPEPDWAAGFAAYWQPGEAGAAARLAAFLEHGLAGYADRRNDPGAAWGTSGL
SPHLHLGEISPRQVWHAAQARGGKGLETFLKELLWREFSHHLLWHRPEMPEAPLRVEFAA
FPWQPDAALLRAWQRGRTGYPIIDAGMRQLWQTGWMHNRVRMITASFLVKHLLQPWQQGE
AWFWDTLVDADLAANSASWQWVAGCGADAAPYFRIFNPVLQGEKFDPTGAYVRRWCPELA
PLPDRFIHKPHEAPEIVLRGAGLQLGRDYPAPVVELAAGRARALAAFAALKGDAAA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgcccgactccgcgattctctggttccgccaggacctccgcctggccgaccaccctgcc
ctgatggccgtggccgaacggccgatcctgccggtgtacatcctcgaggacgggccgtgg
gcgccgggcggggcggcccggtggtggctgcatcattccctggcggcgctggggcgtgac
ctggccgaacgcggcgcgccgctggtgctgctgcgcggcgacccgcgccggctgctgccg
gacctcgcggccgcggtcggcgcgaccgagatccatgccgggcggcgcaccgaaccggcc
gggcggcgctgcgatgccgagacccacgccgcgctgcaggccgccggtacgcggctggtg
ctgcaccgcaccgcgctgctgcacgaaccgcaccaggttcgcaccggatccggcacgccc
tatggcgtctacacgccgttctcgcgcaacgtcttcgggctgctggagggcctggcgccc
gcgctgcccgcgcccgcgcgtctgtccaccgccccgggtgcgccggccggcctcagcctc
gacgagctggccttgctgccacggctgccggaacccgactgggcggcgggcttcgccgcg
tattggcagcccggcgaggctggcgcggcggctcggctggcggccttcctggagcacggg
ctggccggttacgcggaccgccggaacgatcccggcgcggcctgggggacctcaggcctg
tcgccgcacctgcacctaggggagatctcgccgcgccaggtctggcatgcggcgcaggcg
cgcggcggcaaggggctcgagaccttcctcaaggaattgctgtggcgggaattctcccat
cacctgctctggcaccggcccgaaatgcccgaggcgccgctgcgcgtcgaattcgccgcc
tttccctggcagccggatgccgcgctgctgcgcgcctggcagcgcgggcgcaccggctac
ccgatcatcgatgccgggatgcggcagctctggcagaccggctggatgcacaaccgggtg
cgcatgatcaccgcgtccttcctggtgaagcatttgctgcagccctggcagcagggcgag
gcctggttctgggacacgctggtcgatgccgacctcgcggcgaacagcgcgtcctggcag
tgggtggcgggctgcggcgcggatgcggcgccatatttccgcatcttcaatccggtgctg
cagggggagaagttcgacccgaccggtgcctatgtgcggcgctggtgcccggaactcgcg
cccctgcccgaccgcttcatccacaagccccatgaggcgcccgagatcgtgctgcgcggg
gcggggctgcagcttgggcgggactatccggcgccggtggtggaactggcggccgggcgc
gcgcgggcgctggccgccttcgccgcgctgaagggcgacgcggcggcgtga
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