Roseomonas fluvialis: Rmf_12450
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Entry
Rmf_12450 CDS
T08992
Name
(GenBank) RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rfl
Roseomonas fluvialis
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rfl03009
]
Rmf_12450
Enzymes [BR:
rfl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Rmf_12450
Ribosome biogenesis [BR:
rfl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Rmf_12450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
MTS
TRAM
Motif
Other DBs
NCBI-ProteinID:
BDG71316
LinkDB
All DBs
Position
complement(1271593..1272885)
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AA seq
430 aa
AA seq
DB search
MTTPVELRVTRMGAAGDGIAALPDGTTCFVPRALPGETVGATPLARSRDGLRARLDAVIL
ASTDRVTPPCVHFEQGCGGCAVQHWAPGAQAGWKRARVAEALSRAGFPAAPVAPTIATPM
GLRRRADLALRRGPGGIRIGFHAAGSAEVLDLDACPVLDARLVALIGPLRALLRRLPALR
REGSAVVNLLDTGPDLLLRTDGPIGPAERALLAAFASEAGLPRIAWAEGNAVPEVAVQHG
PVGIALSGVTVVPPPGAFLQASPAGEAAIIAAVLAGLPARLAGRGRIADLHAGLGTLSIP
LAARGRVAAFESDAGAVAALSAAAGRAGLPLAATRRDLARQPLTLAELAPFAAVVLDPPF
AGAAEQAALLARSAVPVVVYVSCSPAALSRDAKAFAQAGWQVAAATPVDQFVHSAQVEAV
VVLTRARARV
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacgccggtcgaactgcgcgtgacacgcatgggtgcggcgggcgatggcatcgcc
gcgctgcccgatggcaccacctgcttcgtcccgcgcgccctgccgggcgagacggtgggc
gccaccccgctcgcgcgcagccgcgacggcctgcgcgcccggctggacgccgtcatcctg
gccagcaccgaccgcgtgaccccgccttgcgtccacttcgaacagggctgtggcggttgc
gccgtgcagcactgggcgccgggggcacaggcgggctggaagcgcgccagggtggccgag
gcgctctcccgcgccgggtttcccgcggcacccgtggcacccaccatcgccaccccgatg
gggctgcgccgccgcgccgacctcgcgctgcggcgcggcccagggggcatccgcatcggc
ttccacgccgccggcagtgccgaggtgctggacctcgacgcctgccccgtgctggacgct
cggctggtcgcgctgatcggcccgctgcgcgcgctgctgcggcgcctgccggcgctgcgg
cgggagggatcggcggtggtgaacctgctcgacaccggcccggacctgctgctgcgcacg
gatggcccgatcgggccggccgagcgcgcgctgctcgccgccttcgcgtccgaggccggc
ctgccgcgcatcgcctgggccgagggcaatgcggtacccgaggtcgcggtgcagcacggc
cccgtcggcatcgcgctctcgggcgtgacggtcgtgccgccgcccggcgccttcttacag
gcgagcccggccggcgaagccgccatcatcgccgccgtactcgccggcctgccggcgcgc
ctggccgggcgcgggcgcatcgccgacctgcatgcggggctcggcacactgtccatcccg
ctcgccgcgcgcgggcgggtcgcggccttcgagagcgatgccggcgccgtggccgcactc
tccgcggcggccgggcgcgctgggctgccgctggccgcgacacggcgggacctggcgcgg
cagccgctgaccctggccgaactcgcccccttcgccgccgtggtgctggacccacccttt
gccggcgcggccgagcaggcggcgttgctcgcgcgcagcgcggtgccggtggtggtctat
gtctcgtgcagcccggcggcgctctcgcgcgacgcgaaagccttcgcgcaggccgggtgg
caggtcgcggccgcgactccggtcgaccagttcgtgcactccgcccaggtcgaggcggtt
gtggtgctgacgcgcgcgcgggcgcgggtctag
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