Roseomonas fluvialis: Rmf_12890
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Entry
Rmf_12890 CDS
T08992
Name
(GenBank) DNA-3-methyladenine glycosylase 1
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rmf_12890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfl03400
]
Rmf_12890
Enzymes [BR:
rfl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Rmf_12890
DNA repair and recombination proteins [BR:
rfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Rmf_12890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
BDG71360
UniProt:
A0ABN6P1Y6
LinkDB
All DBs
Position
1315773..1316420
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AA seq
215 aa
AA seq
DB search
MTIGSPEALRHLRRDPLLKRVIRQVGPCTLVPARRQPYEALVRAIAHQQVHGRAAEAILG
RFIACCCPDGFPAPEAVLATTPEAMRACGLSANKVLAIRDIAEKAAAGIVPTRAQARRLS
DDALVDRLVPLRGVGRWTVEMLLIFTLGRVDILPVDDFGVREGYRVAAGLDEQPKPRALG
EIGQAWAPHRTTAAWYLWRAADLAKDGRFKAPAAI
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgggtcgccggaggcgctgcggcacctccggcgcgacccgttgctgaagcgc
gtcatccgccaggtcgggccctgcacgctggtgccggcacggcgccagccctacgaggcg
ctggtgcgcgccatcgcgcaccagcaggtgcatggccgcgcggccgaggcgatcctcggc
cggttcatcgcctgctgctgcccggacggctttcccgcaccggaggccgtgctggcgacg
acgccggaggcgatgcgcgcctgcggcctctcggccaacaaggtgctcgcgattcgcgac
atcgcggagaaggcggcggccggcatcgtgcccacccgcgcgcaggcgcgccgcctgtcg
gacgatgcactggtcgaccgcctagtgccgctgcgtggtgtcggccgctggacggtcgag
atgctgctgatcttcacgctcggccgcgtcgatatcctgcccgtcgatgatttcggcgtg
cgcgagggctatcgcgtcgccgcggggctcgacgaacaaccgaagccgcgggcgctgggc
gagatcgggcaggcctgggcgccgcaccgcacgaccgccgcctggtacctgtggcgcgcc
gcggacctggcgaaggacggcagattcaaggcgccggccgctatctga
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