Roseomonas fluvialis: Rmf_14180
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Entry
Rmf_14180 CDS
T08992
Symbol
ruvB
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Rmf_14180 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfl03400
]
Rmf_14180 (ruvB)
Enzymes [BR:
rfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rmf_14180 (ruvB)
DNA repair and recombination proteins [BR:
rfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Rmf_14180 (ruvB)
RecFOR pathway proteins
Rmf_14180 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
TIP49
AAA_3
Mg_chelatase
AAA_16
TsaE
Rad17
AAA_33
NB-ARC
nSTAND3
AAA_17
AAA_18
RNA_helicase
NACHT
Parvo_NS1
AAA_28
NTPase_1
NPHP3_N
AAA_14
ABC_tran
IstB_IS21
AAA_24
Motif
Other DBs
NCBI-ProteinID:
BDG71489
LinkDB
All DBs
Position
1438564..1439628
Genome browser
AA seq
354 aa
AA seq
DB search
MSGGPAAGGTSGDRITDPERQDDDYGEHALRPQTIADFTGQQSLRENLGVFIAAARARAE
PMDHVLFHGPPGLGKTTLAQIVARELGVGFRATSGPVLQRSGDLAAILTNLQPRDVLFVD
EIHRLQPAIEETLYPAMEDFCLDLIIGEGPAARTVRIDIPPFTLIGATTRAGLLATPLRD
RFGIPLRLVFYTAAELHGIVSRGARKLNFALSDDGAFEIAKRSRGTPRIAGRLLRRVRDF
ALVENRAADRAMVDGALLRLEVDALGLDAMDRRYLRRIAEHHGGGPVGIETLAAALAEGR
DTLEEVVEPFLIQEGLVLRTPRGRMLGEAGWRHLGLAPPAGLVAQLDLLRDTDP
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcgggcccgccgcgggcgggacgagcggcgatcgcatcaccgaccccgagcgc
caggacgacgactatggcgagcacgcgctgcgcccgcagaccatcgcggacttcaccggc
cagcagtcgctgcgcgagaacctcggcgtgttcatcgcggcggcgagggcacgcgcggag
ccgatggaccatgtgctgttccatggcccgccggggctgggcaagaccacgctggcgcag
atcgtcgcgcgtgaactgggcgtgggttttcgcgcgacctcggggccggtgttgcagcgt
tcgggcgacctcgcggcgatcctgacgaacctgcagccgcgcgacgtgctgttcgtcgat
gagatccatcgcctgcaaccggccatcgaggagacgctctatcccgcgatggaggatttc
tgcctcgacctcatcatcggcgaaggtcctgccgcgcgaaccgtgcggatcgacattccg
cccttcacgctgatcggcgcgaccacccgcgcggggctgctcgcgacaccgctgcgcgat
cgcttcggcattccgctgcgcctggtgttctacacggcggccgaactgcacggcatcgtc
agccgcggcgcgcgaaaattgaactttgcgctgtcggatgatggggcgttcgagatcgcc
aagcgctcgcgcggcacgccgcgcatcgcggggcggctgctgcggcgcgtgcgggatttc
gcgctggtggagaaccgtgccgccgaccgcgccatggtcgatggtgcgttgttgcgactg
gaggtggatgcgctcggcctcgatgcgatggaccggcgctatctgcgccgcatcgccgaa
caccatggcggcgggccggtcggcatcgagacgctggccgcggcgctggccgaaggccgg
gacacgctcgaggaagtggtcgagcccttcctgatccaggaaggcctggtgctgcgcacg
ccgcgcgggcggatgctgggcgaggccggctggcgccacctgggactcgccccgccggcg
gggctggtggcgcagctcgacctgttgcgggacaccgatccgtga
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