Roseomonas fluvialis: Rmf_17210
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Entry
Rmf_17210 CDS
T08992
Symbol
fadD_2
Name
(GenBank) long-chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl00061
Fatty acid biosynthesis
rfl00071
Fatty acid degradation
rfl01100
Metabolic pathways
rfl01212
Fatty acid metabolism
rfl02024
Quorum sensing
rfl04146
Peroxisome
Module
rfl_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rmf_17210 (fadD_2)
00071 Fatty acid degradation
Rmf_17210 (fadD_2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rmf_17210 (fadD_2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rmf_17210 (fadD_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rfl01004
]
Rmf_17210 (fadD_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rfl04147
]
Rmf_17210 (fadD_2)
Enzymes [BR:
rfl01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rmf_17210 (fadD_2)
Lipid biosynthesis proteins [BR:
rfl01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rmf_17210 (fadD_2)
Exosome [BR:
rfl04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rmf_17210 (fadD_2)
Exosomal proteins of breast cancer cells
Rmf_17210 (fadD_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BDG71792
UniProt:
A0ABM7Y1X5
LinkDB
All DBs
Position
complement(1748898..1750427)
Genome browser
AA seq
509 aa
AA seq
DB search
MALLARWAEATPDKVAAHFPDLGRAITFGELDARATRIAQWLVALGLQPGDGIAMLMDNR
PEFFEVAFACRRAGLYYTPLSVHLRPSEVAYMLGDAGAKAVIVSPGVADLATAMLREGAT
GSVPRFAVGEGLPGYDGFEAAIVAAPAHPLPQRPVGREFLYSSGTTGLPKGIKRPLVAWE
NRLAPDWDMTWKTLYACGPGMTYLSPAPLYHAAPHSFTIRRTIAEGGTVVVMAKFDPLRA
LELIEQYGVTHSQWVPTMFVRLLALPDADRRRFDLSSHRIAIHAAAPCPVGVKQRMMDWW
GPIIWEYYAGSESVGTTVVSPQDWPLRPGTVGRPVNGVTLHIVDDEGRDMPSGQVGRICF
AGAPRFAYHNAPEKTAAAYDAQGRATLGDLGRVDDEGWLYLSDRRADLILSGGVNIYPAE
IEAVIARHPDVAEVAIVGIPHAEFGEQVHAVIVPRGRGDGLQATLEALCREHLAGPKRPR
SWEFVDELPRSEAGKLLRRILKERYLSPS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttggcgcgctgggcagaggccacgcccgacaaggtcgcggcgcatttcccc
gatctcgggcgtgccatcaccttcggcgaactggacgcgcgcgcgacacgcatcgcgcaa
tggctggtcgcactcggcctgcagccaggcgacggcatcgccatgctgatggacaaccgg
ccggaattcttcgaagtcgccttcgcctgccggcgcgcggggctctactacacgccgctg
tcggtgcatctgcggccgagcgaggtcgcctacatgctgggcgatgcgggtgcgaaggcg
gtgatcgtctcgccgggcgttgccgacctcgcgaccgccatgctgcgcgaaggtgcaacc
ggcagcgtgccgcgcttcgcggtgggcgaagggctgccgggctatgacggcttcgaggcc
gccatcgtcgcggcccccgcccacccgctgccgcagcgcccggtcgggcgcgaattcctc
tactcctcgggcaccaccggcctgccgaaggggatcaagcgcccgctcgtggcgtgggag
aaccgcctggcgccggactgggacatgacctggaagaccctctatgcctgcgggccaggg
atgacctacctctcccctgcgccgctgtaccacgcggcaccgcacagcttcaccatccgc
cgcaccatcgccgaaggcggcaccgtcgtggtgatggcgaagttcgacccgctgcgcgct
ctggaactgatcgagcagtacggcgtcacccacagccaatgggtgccgaccatgttcgtg
cgccttctggcattgccggatgccgatcggcggcgattcgacctgtcgtcgcatcgcatc
gcgatccacgccgccgccccctgccccgtcggcgtcaagcagcggatgatggactggtgg
ggtccgatcatctgggaatactacgcgggatccgagagcgtcggcacgactgtggtctcg
ccgcaggattggccgctacggcccggcacggtgggccgccccgtaaacggcgtgacgctg
catatcgtcgatgacgagggccgcgacatgccgtctggccaggtcggacgcatctgcttc
gccggcgcgccgcgcttcgcgtaccacaacgcgccggagaagaccgccgcggcctatgac
gcgcagggccgcgccacgcttggcgacctcggccgcgtggacgatgaaggctggctgtac
ctgtccgaccgccgcgccgacctcatcctgtccggcggcgtcaatatctacccggccgag
atcgaggccgtcatcgcgcggcatccggacgtcgccgaggtcgccatcgtcggcatcccg
catgccgaattcggcgagcaggtgcatgcggttatcgtgccgcgcggccgcggggatggc
cttcaggcgacgctggaggcgctgtgccgcgaacacctggccggccccaagcgcccgcgc
tcgtgggaattcgtggacgaactcccgcgcagcgaggccggcaagctgctgcgcaggatc
ctgaaggagcgctacctcagcccgtcctga
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