Roseomonas fluvialis: Rmf_18500
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Entry
Rmf_18500 CDS
T08992
Symbol
clpB_1
Name
(GenBank) chaperone protein ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
rfl
Roseomonas fluvialis
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rfl03110
]
Rmf_18500 (clpB_1)
Chaperones and folding catalysts [BR:
rfl03110
]
Heat shock proteins
HSP100
Rmf_18500 (clpB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_16
AAA_22
AAA_23
Sigma54_activat
nSTAND3
bpMoxR
AAA_7
TniB
Mg_chelatase
AAA_24
AAA_14
IstB_IS21
NACHT
Roc
T2SSE
TsaE
AAA_3
AAA_29
NBD_SMAX1
AAA_25
DNA_pol3_delta2
MTR4-like_stalk
DUF6435
COG6_N
Motif
Other DBs
NCBI-ProteinID:
BDG71921
UniProt:
A0ABM7Y271
LinkDB
All DBs
Position
1878903..1881488
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AA seq
861 aa
AA seq
DB search
MDIEKFTDRARGFLQAAQTIAIREYHQQVTPGHLAKALLDDAEGAASGLIRAAGGDPARV
KQAVEAVLAKLPKVSGGGAGQPQFTPDIVRVLDAAQQQAQRAGDEYVAQDRLLVALAASE
GDAGRAFRDAGADPQRLEKAVADLRKGRTVNSQNAEQTFDALKKYARDITAAAREGKLDP
VIGRDEEIRRSIQVLARRTKNNPVLIGEPGVGKTAIVEGLALRIVKGDVPEALKDKKVMA
LDLGAMVAGAKYRGEFEERLKGVLSEVTEAAGEIILFIDEMHTLVGAGKADGAMDASNLL
KPALARGELHCIGATTLDEYRKHVEKDAALARRFQPVFVGEPSVEDTISILRGIKEKYEL
HHGVRITDGALVAAATLSNRYITDRFLPDKAIDLVDEASSRLRMQVDSKPEELDAIDRDL
MRLKIEREALKKETDAASRDRLGKLEKELADLEERSNEMTQRWEAEKGKVVESQKLKEQL
DKARTDVELAQRKGDLAKASELLYAVIPGIEKKLAEAGDDDARLVNEAVTEEGIAAVVSR
WTGVPVEKMLEGERAKLLRMEDSLRRRVVGQEEALEAVSKAVRRARAGLQDPNRPIGSFL
FLGPTGVGKTELVKALAQFLFDDERAMTRIDMSEFMEKHAVSRLIGAPPGYVGYEEGGTL
TEAVRRRPYQVILFDEVEKAHDDVFNVLLQVLDDGRLTDGQGRTVDFRNCIIVLTSNLGS
QAIAELPENAEVDTVRPAVMRAVRERFRPEFLNRLDEIVLFRRLARADMASIVDIQLERL
LKLLEDRKVRLELDAKAREWLAEAGYDPVYGARPLKRVIQRNLQDRLAGLLLEGSIKDGD
VVRVSASQDGLEVRPGLAEAA
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgagaagttcaccgatagggcgcgcggcttcctacaggctgcgcagaccatt
gcgatccgcgagtaccatcagcaggtcacgccggggcacctggcgaaggctttgctggat
gatgccgagggggcggccagcgggttgattcgcgcggccggcggcgatccggcgcgggtc
aagcaggccgtcgaagcggtactggcgaagttgccgaaggtctccggcggaggcgcgggg
cagccgcagttcacccccgatatcgtgcgcgtgctggatgccgcgcagcagcaggctcag
cgagccggcgacgaatacgtcgcgcaggaccggctgctggtggcgctcgccgcaagtgag
ggcgatgccgggcgcgcctttcgggacgcgggtgccgatccgcagcggctggaaaaggcc
gtggcggacctgcgcaagggccgcaccgtcaacagccagaatgccgagcagaccttcgat
gcgctgaagaagtacgcgcgcgacatcaccgccgcggcgcgcgagggtaagctcgatccc
gtgatcggccgtgatgaggaaatccggcgctcgatccaggttctggcgcggcgcaccaag
aacaaccccgtgctgatcggtgagcccggcgtgggcaagacggcgatcgtcgagggcttg
gcacttcgcatcgtgaagggcgacgtgccggaggcgctgaaggacaagaaggtgatggcg
ctcgacctcggcgccatggtcgccggggcgaagtaccgcggcgagtttgaggaacgcctg
aagggcgtgctgtccgaggtgaccgaggctgcgggcgagatcatcctgttcatcgacgag
atgcacacgctggtcggcgcgggcaaggcggacggcgcgatggatgcgtcgaacctcctg
aagccggcgctggcgcgcggcgagctgcattgcatcggcgcgaccacgctcgatgagtac
cgcaagcatgtggagaaggacgccgcgttggcgcgtcgcttccagccggtgttcgtgggc
gaaccgagcgtggaggacacgatcagcatcctgcgcggcatcaaggagaagtacgagctg
caccacggcgtgcgcatcaccgacggggcgctggtggcggccgccacgctgtccaaccgc
tacatcacggaccgcttcctgccggataaggcgatcgacctggtcgacgaggcgtcgtcg
cgcctgcgcatgcaggtggacagcaagcccgaggagctggacgcgatcgatcgcgacctg
atgcggctcaaaatcgagcgggaagcgctgaagaaggagactgacgcggcttcgcgcgac
cggctgggcaagctcgagaaggagctggccgatctcgaggaacgctcgaacgagatgacg
cagcgctgggaggcggagaagggcaaggtcgtcgagagccagaagctcaaggagcagctg
gacaaggcgcgcaccgacgtggagctggcgcagcgcaagggcgacctcgcgaaggcgtcc
gaactgctctacgcggtcatcccgggcatcgagaagaagctggccgaggccggggacgac
gatgcgcggctggtgaacgaggccgtcaccgaggaaggcatcgcagccgtcgtgtcgcgc
tggaccggcgtaccggtcgagaagatgctggaaggcgagcgcgccaagctgctgcgcatg
gaagactcgctgcgccgccgcgttgtcggccaggaggaggcgctggaagcggtctcgaag
gccgtgcggcgtgcgcgggcagggctgcaggatcccaaccggccgatcgggtcgttcctg
ttcctcggcccgacgggtgtgggcaagaccgagttggtgaaggcgctcgcgcagttcctg
ttcgacgacgagcgggcgatgacgcgcatcgacatgagtgagttcatggagaagcacgcc
gtctcgcgcctgatcggcgcgccgcccggctatgtcggctacgaggaaggcggcacgctg
acggaagcggtgcggcggcggccctaccaggtgatcctgttcgatgaggtcgagaaggcg
catgacgacgtcttcaacgtgctgctgcaggtgctcgacgacgggcgcctgacggacggg
caggggcgcacggtcgacttccgcaactgcatcatcgtgctgaccagcaatcttggcagc
caggcgatcgcggagcttcccgagaacgccgaggtggacacggtgcgcccggcggtgatg
cgcgcggtgcgcgagcgcttccggccggagttcctgaaccggctggacgagatcgtgctg
ttccggcggcttgcgcgggcggacatggcctcgatcgtcgatatccagctggagcggctg
ctgaagctgctcgaggaccggaaggtgcggctcgaactggacgcgaaggcgcgggagtgg
ctggcggaagcaggctacgacccggtctatggtgcgcggccgctcaagcgcgtcatccag
cgcaacctgcaggaccggctcgccgggctcctgctggagggcagcatcaaggacggcgac
gtggtgcgcgtgagcgcgtcgcaggacgggctcgaggtgcggcccgggctggccgaggcg
gcgtag
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