Roseomonas fluvialis: Rmf_23060
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Entry
Rmf_23060 CDS
T08992
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl00071
Fatty acid degradation
rfl00362
Benzoate degradation
rfl00650
Butanoate metabolism
rfl01100
Metabolic pathways
rfl01120
Microbial metabolism in diverse environments
rfl01200
Carbon metabolism
rfl01212
Fatty acid metabolism
Module
rfl_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
Rmf_23060
09103 Lipid metabolism
00071 Fatty acid degradation
Rmf_23060
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Rmf_23060
Enzymes [BR:
rfl01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
Rmf_23060
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Paralog
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Pyr_redox_2
NAD_binding_2
NAD_binding_7
DAO
Pyr_redox
AlaDh_PNT_C
Methyltransf_12
TrkA_N
NAD_Gly3P_dh_N
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
BDG72377
UniProt:
A0ABM9SEF0
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Position
2378154..2380223
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AA seq
689 aa
AA seq
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MSDFVQHAQHGDVHVLRLANPPVNTLRTEIRAGLHAGLAAAKAGGAKAVVLIGTGRMFCA
GAEMTEFGKPRQPPSLTEVFDAIEGFPGIVVAAIHGSALGGGLELALACHARVAAPGAQV
GLPEVKRGFVPGAGGTQRLPRLIGPEEAAKIIISGDPIPAEKAVKLGVVDAVIEGDLEAG
AVAWAKAAIGKTFTLARNRTDKISGQDPAAFEAVVAGLLKRTRGQESPKGCAEAVRASFT
LPFEEGLAKERDLFATLVAGEQSKALRHIFFGEREVLRIPGMPAEAKSLPVERLVVIGGG
TMGGGIAMSAANNGVPVTIVETSEEALQKGLARCHANWERTVASGRLSQADYEKRKALLT
GSTDFEGTVEKADLVIEAVFENMAVKKEVFARLDKAARPGVVLASNTSTLSIDEIASATS
RPELVVGMHFFSPANVMRLLENVRGSKSSWATIATATEFGKRIGKLPVLVGNCDGFVGNR
MTGKRGPQVEKLLLEGCLPADIDKVMEGYGMAMGPLATGDLAGLDIGAAVRKARGTVAPV
ADAVVALGRFGQKTGKGWYMYDEKRNRLPDPEVEKIILDVAEKMQVRRRKISDEEILDRM
LLPMVNEGARILEEGIAYRPIDIDVIFINGFGWPAFRGGPMFWADTQGLKTVRDKLARYA
EATNDANLKPTALIEKLAAEGGTFAGMGR
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacttcgtgcagcacgcgcagcatggcgatgtccatgtgctgcgcctggccaac
ccgccggtgaacacgctgcggacagagattcgtgccgggctgcatgccgggctggcggcg
gcgaaggccggcggcgcgaaggcggtggtgctgatcggcaccggccgcatgttctgcgcc
ggcgccgagatgaccgaattcggcaagccgcggcagccgccgtcgctgaccgaggtgttc
gacgcgatcgagggcttccccggcatcgtggtcgcggcgatccatggttcggcgctgggc
ggcgggctggaactggcgctggcctgccatgcgcgcgtggccgcaccgggcgcgcaggtc
gggctgccggaagtgaagcgcggcttcgtgcccggcgcgggcggcacgcagcgcctgccg
cgtctgatcgggccggaggaagcggccaagatcatcatcagcggcgacccgatcccggcc
gagaaggcggtcaagctcggcgtggtggatgcggtgatcgagggcgacctcgaggccggc
gcggtggcctgggcgaaggcggcgattgggaagaccttcacgctggcgcgcaaccgcacc
gacaagatcagcggccaggatccggcggcgttcgaggccgtggtggcaggtctgctcaag
cgcacgcgcgggcaggaaagcccgaagggctgtgcggaggcggtgcgcgcgtccttcacg
ctgccgttcgaggagggcctcgcgaaggaacgcgacctgttcgcgacgctggtggcgggc
gagcagtccaaggcgctgcgccacatcttcttcggcgagcgcgaggtgctgcgaatcccg
ggcatgcccgcggaggcgaagtcgctgccggtcgaacgcctggtggtgatcggcggcggc
acgatgggcggcggcatcgccatgtcggctgcgaacaatggcgtgccggtgaccatcgtc
gagaccagcgaggaagccctgcaaaagggtctggcgcgctgccatgcgaattgggaacgg
acggtggcgtcgggccggctgtcgcaggccgactatgagaagcgcaaagccctgctgacc
ggcagcaccgatttcgaaggcaccgtggaaaaggccgacctggtgatcgaggcggtgttc
gagaacatggccgtgaagaaggaagtcttcgcacgactcgacaaggcagcgcggccgggc
gtggtgctggcgtccaatacctcgacactgtcgatcgacgagatcgccagcgcgacgtct
cgcccggaactggtggttgggatgcacttcttctcgcctgccaatgtcatgcggctgctg
gagaatgtgcgcgggtcgaaatcctcctgggcgacgatcgcgacggcaacggagttcggc
aagcggatcggcaagctgccggtgctggtcggcaattgtgacggcttcgtcggcaaccgc
atgaccggcaagcgcggcccgcaggtggaaaagctgctgctggaaggctgcctgccggcc
gacatcgacaaggtgatggaaggctacggcatggccatggggccgctcgcgacgggtgac
ctcgcgggcctcgatatcggcgcggcggtgcgcaaggcgcgcgggacggtcgcaccggtg
gccgacgccgtcgtggcgctggggcgcttcgggcagaagaccggcaagggctggtacatg
tacgacgagaagcgcaaccgcctgccggacccggaggtcgagaagatcatcctcgacgtc
gcggagaagatgcaggtgcggcggcgcaagatatccgacgaggagatcctcgaccgcatg
ctgctgccgatggtgaacgaaggcgcgcgcattctcgaggaaggcatcgcctaccgtccc
atcgacatcgacgtgatcttcatcaacggcttcggctggcctgccttccgcggcgggccg
atgttctgggcggatacccaggggctgaagaccgtgcgcgacaagctggcgcgctatgcc
gaggcgaccaacgacgccaacctgaagccgacggcgctgatcgaaaagctcgcggccgag
ggcgggaccttcgccggcatgggccgctga
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