Roseomonas fluvialis: Rmf_25160
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Entry
Rmf_25160 CDS
T08992
Name
(GenBank) transcriptional regulator
KO
K03530
DNA-binding protein HU-beta
Organism
rfl
Roseomonas fluvialis
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfl03032
]
Rmf_25160
03036 Chromosome and associated proteins [BR:
rfl03036
]
Rmf_25160
03400 DNA repair and recombination proteins [BR:
rfl03400
]
Rmf_25160
DNA replication proteins [BR:
rfl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Rmf_25160
Chromosome and associated proteins [BR:
rfl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Rmf_25160
DNA repair and recombination proteins [BR:
rfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Rmf_25160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
Nup214_FG
DUF2267
Rpf1_C
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
BDG72587
LinkDB
All DBs
Position
complement(2591807..2592082)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKQDLIAAVAEATDLPKAKTGDVVDAVFTAIEKALSKKGGEVRLVGFGTFSTSKRKAGK
GRNPRTGEEIKIPASTTVRFKAGKGLKDAVN
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagcaggacctcatcgccgccgtcgccgaggcgaccgatctgccgaaggcgaag
acgggcgacgtcgtggacgcggtgtttaccgcgatcgaaaaggcgctgtcgaagaagggc
ggcgaggttcgcctggtcggcttcggcaccttctcgacctccaagcgcaaggccggcaag
ggccgcaatccgcgcaccggcgaggagatcaagatccccgccagcacgaccgtgcgcttc
aaggccggcaagggcctgaaggacgccgtgaactga
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integrated database retrieval system
