Roseomonas fluvialis: Rmf_25230
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Entry
Rmf_25230 CDS
T08992
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl03030
DNA replication
rfl03430
Mismatch repair
rfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rmf_25230
03430 Mismatch repair
Rmf_25230
03440 Homologous recombination
Rmf_25230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfl03032
]
Rmf_25230
03400 DNA repair and recombination proteins [BR:
rfl03400
]
Rmf_25230
Enzymes [BR:
rfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rmf_25230
DNA replication proteins [BR:
rfl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rmf_25230
DNA repair and recombination proteins [BR:
rfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rmf_25230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_22
AAA_16
nSTAND3
AAA_5
AAA_24
Mg_chelatase
AAA_33
MeaB
RuvB_N
AAA_19
AAA_2
RNA_helicase
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
BDG72594
LinkDB
All DBs
Position
complement(2600177..2601175)
Genome browser
AA seq
332 aa
AA seq
DB search
MEPRANPDLVGHEAAARSMEAAARSGRLHHAWLICGPPGIGKATLAWRFARWLLADMPRG
ATPLAVDPSSTVFRRVAADTHADCFTLEPNTGERGVKRILRVEDAREAVRFLTQTAAEGG
WRVVVLDEAERADQAAVQNTLLKTLEEPPPKTVLLLVCAAPQKLLPTIRSRCRRIDLNPL
AGPEMEALLARLLPDTPATDRARIAALADGAPGRAMALAEAGGLDLQAMVEASLAALAKP
EPPRDHALADRLAADRTGGAFGIFMGLLRGAIAGALRDAARGRAAPPWLARHPLAVWAGL
WDRLGDLADDTERLNLDRKQAVLTGLDWLARP
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgcgcgccaatcccgacctggtcggccacgaggctgccgcgcgcagcatggag
gctgccgcgcgatcgggccggctgcatcacgcctggctgatctgcgggccgcccgggatc
ggcaaggcaacgctggcctggcgcttcgcgcggtggctgctggccgacatgccgcggggc
gcgacgccgctcgcggtcgatccgtcgagcacggtgttccgccgcgtcgccgccgacacc
catgccgattgcttcacgctggagcccaacaccggcgagcgcggcgtgaagcgtatcctg
cgtgtcgaggatgctcgcgaggcggtgcgcttcctgacccagaccgccgccgagggcggc
tggcgcgtggtggtgctggacgaggccgagcgcgccgaccaggcagcggtgcagaacacg
ctgctcaagacgctcgaggaaccgccgccgaagacggtgctgctgctggtctgcgcggcg
ccgcagaagctgctgccgacgatccgcagccgctgccggcggatcgacctgaacccgctg
gcgggtccggagatggaagcgctgctcgcgcgcctgctgcccgacacgccggcgaccgat
cgtgcgcggattgcggcactggcggatggcgcgcccgggcgcgccatggcgctggccgag
gctggcggcttggacttgcaggcgatggtggaggccagcctggcggcgctggcgaagccc
gaaccgccgcgcgaccacgcgctggcggacaggctcgctgccgaccgtacgggcggcgcc
ttcggcatcttcatgggactgctgcgcggggcaatcgcgggggcgttgcgcgacgccgcg
cgcgggcgtgccgccccgccctggctggcccgccatccgcttgccgtgtgggcggggctg
tgggataggctcggcgaccttgcggacgacaccgagcggttgaacctcgaccgcaagcag
gcggtgctgacgggcctcgactggctcgcgcggccctga
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