Roseomonas fluvialis: Rmf_26310
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Entry
Rmf_26310 CDS
T08992
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rfl
Roseomonas fluvialis
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfl03032
]
Rmf_26310 (gyrA)
03400 DNA repair and recombination proteins [BR:
rfl03400
]
Rmf_26310 (gyrA)
Enzymes [BR:
rfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Rmf_26310 (gyrA)
DNA replication proteins [BR:
rfl03032
]
Prokaryotic type
DNA Topoisomerases
Rmf_26310 (gyrA)
DNA repair and recombination proteins [BR:
rfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Rmf_26310 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BDG72702
LinkDB
All DBs
Position
complement(2720578..2723316)
Genome browser
AA seq
912 aa
AA seq
DB search
MSDPSTPEQPPFDTQPVALEEEMRRSYLDYAMSVIVARALPDARDGLKPVHRRILFAMQE
AGYTADKPYRKSARVVGDVMGKYHPHGDASIYDAMVRMAQPFSMRVPLIDGQGNFGSVDG
DPPAAMRYTEARLAPSAMALLEGIDEDTVDFQANYDESAEEPRVLPAAFPNLLVNGANGI
AVGMATNIPTHNPTEIIDATLALVADNSLTLDDLMRIVPGPDFPTGGLILGRAGIRSAFE
TGRGSIPLRARAEIEEMKGNRQCIAVSEIPYQVNKSTLLEKIAELVRAKAIEGISDLRDE
SDRSGMRIVIELKRDATAEVVLNQLYRMTQLQTSFAVNFLALNNGRPQQMGLKDALMAFI
AFREEVILRRSRHRLAKARERGHLLIGLAIAVANIDEVIRVIRASADAATARAALMDRAW
PAGDVGVLLALVDDYRNVITPEGTVRLTEEQARGILELRLQRLTGLERDKITGELGEVGD
RIRDLLDILGSRARRMEVMTAELLKVRAEIASPRMTQIVDHVADVDDESLIEPGTMVVTL
TRDGYVKRTPLDTFRAQGRGGKGRTGAGTREDDVVIRSFVAHTHQFVLFFTSRGMAFREK
VWQLPEASPTARGRSLRQVLNLQDGESVTAVLPLPLDETLWEGLHLVFATLHGNVRRNRL
SDFRNVRSSGLIAMKLGERDSLIGVSTCREGDDVMLATRLGRCIRFQAEPDTLRLFAGRD
SDGVRGIRLQEGDSVIALSVLRHIEASPAERAAYLKAAAAKRRAGDEEAEAPTAADDAEE
PVVEIALTPERFDELEAAEEIILAVTDGGFGKRTSAHEYRVTGRGGQGITGITLSKRTGR
EVVATFPVRPGDHLMLVTDGGQLIRIESDDVRITGRQGMGVTLMRLSDGERVISCFPIAD
EGEDDEAAADHD
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaccccagcacccccgagcagccccccttcgacacgcagcccgtggctctcgag
gaggagatgcgccgctcctacctcgactacgccatgagcgtgatcgtcgcgcgcgccttg
cccgacgcgcgcgacgggctgaagccggtgcaccggcgcatcctgttcgccatgcaggag
gccggctacacggccgacaagccgtatcgcaagtcggcccgcgtggttggcgacgtgatg
ggcaagtatcacccgcatggcgatgcctcgatctacgacgccatggtgcgcatggcgcag
ccgttttcgatgcgcgtgccgctgatcgacgggcaggggaatttcgggtccgtcgatggc
gatccgccggcggcgatgcgctacacggaagcgcggctggcaccatccgccatggcgctg
ctggaaggaatcgacgaggacacggtcgatttccaggccaactacgacgagagcgcggaa
gaaccgcgcgtgctgcccgccgccttcccgaacctgctggtgaacggcgcgaacggcatc
gcggtcggcatggcgaccaatatcccgacgcataacccgaccgagatcatcgacgccacg
ctcgcgctggtggcggacaattcgctgacgctcgacgacctgatgaggatcgtgcccggg
ccggacttcccgaccggcgggttgatcctggggcgcgcgggcatccgctcggccttcgag
accggcagggggtcgatcccgctgcgcgcgcgcgccgagatcgaggagatgaagggcaac
cgccagtgcatcgcggtcagtgagatcccgtaccaggtcaacaagtccacgctgctcgag
aagatcgcggagctggtgcgcgccaaggcgatcgagggaatctcggacctgcgcgacgaa
tccgaccgctccgggatgcggatcgtgatcgagctgaagcgcgatgcgacggccgaggtg
gttctgaaccagctctatcgcatgacgcagctgcagacctccttcgcggtgaacttcctg
gcgttgaacaacggccggccgcagcagatggggctgaaggacgccctgatggcgttcatc
gccttccgcgaggaggtcatcctgcgccggtcgcgccatcgtctggccaaggcgcgcgag
cgggggcatctgctgatcggcctggcgatcgccgtggcgaacatcgacgaggtgatccgc
gtgatccgcgccagcgcggatgccgcgacggcccgcgccgcgctgatggaccgtgcctgg
ccggccggcgatgtcggcgtgttgctggcgctggtggacgactatcgcaacgtcatcacg
ccggagggcacggtgcgcctgacggaagaacaggcgcgcggcatcctggaactgcggctg
cagcggctgacgggcctcgagcgcgacaagatcaccggcgaactgggcgaagtgggcgat
cgcatccgcgacctgctcgacatcctgggcagccgcgcgcgccgcatggaggtgatgacc
gcggaactgctgaaggtgcgcgcggagatcgcctccccgcgcatgacgcagatcgtcgac
cacgtcgccgacgtcgatgacgagagcctgatcgagcctggtaccatggtggtgacgctg
acgcgcgacggctacgtcaagcgcacgccgctcgataccttccgcgcgcaggggcgcggc
gggaagggacgcaccggggccggcacgcgcgaggacgatgtcgtcatccggtccttcgtc
gcgcatactcaccagttcgtgctgttcttcaccagccgcggcatggccttccgcgagaag
gtctggcagttgccggaggcgagcccgacggcgcgggggcgttcgctgcgccaggtgctg
aacctgcaggatggcgagagcgtcaccgccgtgctgccgctgccactcgacgaaaccctg
tgggaaggcctgcacctggtcttcgcgaccctgcacggcaatgtgcggcgcaatcggctg
tcggatttccgcaatgtgcggtcgtcgggcctgatcgcgatgaagctcggggaacgcgac
agcctgatcggcgtctcgacctgccgcgagggcgatgacgtgatgctcgcgaccaggctg
ggccgctgcatccgcttccaggcggaacccgatacgctgcgcctgttcgccgggcgcgat
tcggatggcgtgcgcgggatccgcctgcaggagggcgacagcgtcatcgcgctgtccgtg
ctgcgccacatcgaggccagcccggccgagcgcgcggcctatctcaaggccgccgcggcc
aagcgccgtgccggcgacgaggaagccgaagccccgaccgccgccgacgacgccgaggag
ccggtcgtcgagatcgcgctgacccccgagcgcttcgacgaactcgaagccgccgaggag
atcatcctcgccgtcaccgatggcgggttcggcaagcgcacctcggcgcatgaataccgt
gtcaccggtcgtggcgggcagggcatcaccggcatcacgctgtccaagcggaccgggcgc
gaggtcgtcgccaccttccccgtgcgccccggcgaccacctgatgctggtgaccgatggc
ggccagctgatccgcattgagtccgatgacgtgcgcatcaccggccggcagggcatgggc
gtgacgttgatgcggctgtcggacggggagcgcgtgatctcctgcttcccgatcgccgac
gaaggcgaggacgacgaggcggcagccgaccatgattga
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