Roseomonas fluvialis: Rmf_26430
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Entry
Rmf_26430 CDS
T08992
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Rmf_26430 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rfl01007
]
Rmf_26430 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rfl03016
]
Rmf_26430 (serS)
Enzymes [BR:
rfl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
Rmf_26430 (serS)
Amino acid related enzymes [BR:
rfl01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
Rmf_26430 (serS)
Transfer RNA biogenesis [BR:
rfl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Rmf_26430 (serS)
Prokaryotic type
Rmf_26430 (serS)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF3243
Motif
Other DBs
NCBI-ProteinID:
BDG72714
LinkDB
All DBs
Position
complement(2735013..2736284)
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AA seq
423 aa
AA seq
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MHDIKAIRDNAAAFDAALARRGVEGKAEAILSLDQARRSSIQQVEALQQQRNALAKSIGD
FKRRGMPTEDVEAQATRLRDSIAAHEHEAKTHDASLRALLEILPNTLDPEVPDGRDESAN
VVLHQHGDIPAFAFTPKQHFELGEALGLMDFATAAKIAGSRFTVLKGALARMERALGHWM
LALHTEQHGYTEASVPLLVNDAVAYGTDKLPKFADDLFRTTDGRWLIPTAEVPLTGFAME
EIFAEADLPLRLTALTPCFRSEAGSAGRDTRGMLRQHQFAKVELVSITTPDASAAEHERM
TRCAERVLTELGLTWRRVFLCAGDTGFGAARTYDLEVWLPGQGAWREISSCSNTRDFQAR
RMNGRFKPKEGKGNQFLHTLNGSGVAVGRALIAVMETFQQEDGSIVVPEVLRPWMGGLER
IGR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatatcaaggcgatccgcgacaatgcggcggcgtttgatgccgcgttggcgcgg
cggggagtggaaggcaaggcggaggcgatcctctccctagaccaggcccggcgttcgagc
atccagcaagtcgaagctctccagcagcagcggaatgctctggcgaaatcaatcggcgac
ttcaagcgccgcggcatgcccaccgaggacgtggaagcgcaagctactcgccttcgcgac
tcaattgctgcgcacgagcatgaggcaaagacacacgacgcctccttgcgagcgctgctc
gaaatcctccccaacaccctcgaccccgaagtccccgacggccgcgacgaatccgccaat
gtcgttctgcaccagcacggcgatatccccgccttcgccttcaccccgaaacagcatttc
gaactcggcgaggcgctcgggctgatggatttcgcgactgccgccaagatcgccggcagt
cgcttcaccgtgctgaagggcgcgctggcgcggatggaacgcgcgctcggccactggatg
ctggcgctgcacacggaacagcacgggtataccgaggcctcggtcccgctgctggtcaac
gacgccgtcgcctatggcacggacaagcttccgaaattcgccgacgacctgttccgcacc
accgatggccgctggctgatcccgaccgccgaggtgccgctgactggcttcgcgatggag
gagatcttcgccgaggccgacctgccgctgcgcctgaccgcgctcacgccctgcttccgc
agtgaggccggcagcgcgggccgcgacacccgcggcatgctgcgccagcaccagttcgcg
aaggtggaactcgtctccatcaccacgcccgatgcctccgccgccgagcacgaacgcatg
acgcgctgcgcggagcgcgtgctgaccgaactcggcctgacctggcgccgcgtgttcctc
tgtgccggcgataccggcttcggcgcggcgcgcacctacgacctggaagtgtggctgccg
ggccagggggcgtggcgggagatttcgtcctgctccaacacccgcgacttccaggcgcgg
cgcatgaacgggcgcttcaagccgaaggaaggcaagggcaaccagttcctgcacacgctg
aacgggtcgggtgttgcggtcggccgcgcgctgatcgcggtgatggagaccttccagcag
gaggacggcagcatcgtcgtccccgaggtgctgcggccctggatgggcgggctggagcgc
atcggccgctga
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