Roseomonas fluvialis: Rmf_26560
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Entry
Rmf_26560 CDS
T08992
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rmf_26560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfl03400
]
Rmf_26560
Enzymes [BR:
rfl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Rmf_26560
DNA repair and recombination proteins [BR:
rfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Rmf_26560
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
BDG72727
UniProt:
A0ABN6P265
LinkDB
All DBs
Position
2747568..2748389
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AA seq
273 aa
AA seq
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MAESAIAKWGGERFPPERMKLATFNVNSIRQRAGHVARFLARAQPDLLFLQETRCTAEQV
PTTEFEALGYHTHAVGQGGGRNGVAVIARIPFDIVAEHLPGDTEDTQARYIEVQAKGLNA
AGIYLPNGNSGGDPGYAYKLAWMDRLRAVAAERLDTFTPFAVLGDFNVCPTDADLAPGAL
PPTDALVRPETRAHFRALLHLGLTDALRALHPAETLFTYWDYGAAFETNRGLRIDHVLLS
PDLAERLDTCEVDTAPRSEAQPSDHTPVIATLR
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
ttggcagaaagcgcgattgccaaatggggcggggagcgcttccctccggagcgcatgaaa
ctcgccaccttcaacgtcaactcgatccgccagcgcgccgggcatgtggcgcgattcctc
gcgcgcgcacagccggacctgctgttcctgcaggaaacccgctgcacggcagaacaggtg
cccaccaccgaattcgaagccctgggctaccacacccacgccgtcggccagggcggcggg
cgcaacggcgtcgccgtcatcgccaggatccccttcgacatcgtcgccgaacacctgccc
ggcgacaccgaggacacccaggcccgctacatcgaagtccaggcaaagggcctgaacgcc
gcgggcatctacctgcccaacggcaattcgggtggcgatccgggctacgcctacaagctc
gcctggatggaccggctgcgcgcggtggccgccgaacggctcgacaccttcacgcccttc
gcggtgctgggcgacttcaacgtctgcccgaccgacgccgacctcgcccccggcgccctg
ccgccaaccgacgccctggtgcgccccgaaacgcgcgcgcacttccgcgccctgctgcac
ctgggcctgaccgatgccctgcgtgcgctgcatccggccgaaaccctgttcacctactgg
gattatggcgccgccttcgagaccaaccgcggcctgcgcatcgaccacgttctgctgagc
ccggacctggccgagcgcctggacacgtgcgaggtggacacagccccgcgcagcgaggcg
cagccctcggaccataccccggtgatcgcgacgctgcgctga
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