Roseomonas fluvialis: Rmf_26600
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Entry
Rmf_26600 CDS
T08992
Symbol
valS
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Rmf_26600 (valS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rfl01007
]
Rmf_26600 (valS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rfl03016
]
Rmf_26600 (valS)
Enzymes [BR:
rfl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
Rmf_26600 (valS)
Amino acid related enzymes [BR:
rfl01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Rmf_26600 (valS)
Transfer RNA biogenesis [BR:
rfl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Rmf_26600 (valS)
Prokaryotic type
Rmf_26600 (valS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
tRNA-synt_1f
tRNA-synt_1e
Motif
Other DBs
NCBI-ProteinID:
BDG72731
LinkDB
All DBs
Position
complement(2751013..2753712)
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AA seq
899 aa
AA seq
DB search
MLDKSFDPAAIEQRLYKGWESSGAFSANPASPAKPFTIMIPPPNVTGSLHIGHALDNTLQ
DVLIRWRRMQGRDALWQPGTDHAGIATQMVVERLLAQQGNADRRTMGREAFIQRVWDWKA
ESGGTITRQLRRLGASLDWPRERFTMDEGLSEAVREVFVRLYREGLLYRDKRLVNWDPKF
LTAISDLEVESKEVKGHLWHLRYPVEGEPGRFLVVATTRPETMLGDTAVAVHPEDARFRD
LVGKRVILPLTGRSIPVVADEYSDPEKGSGAVKITPAHDFNDFDLGKRHDLPMPSVLDAE
GRVMLEEIATGFVAVEGVADLDFVRSLAGQDRFAARKAIVARLEELELVEKIEPHTHAVP
HGDRSGVPIEPRLTMQWYVDAKTLAAPAIKAVETGQTVFTPKQWENTFFAWMRDIQPWCV
SRQLWWGHQIPAWYAPDGEVFVAHTEAEARDLARTKFGRDVDLVRDEDVLDTWFSSALWP
FSTIGWPQKTPELAKYYPGDVLVTGFDIIFFWVARMMMMGIHFMGEVPFKTVCIHGLVRD
EKGQKMSKSKGNVLDPLELVDAHGADAVRFTLCALAGPGRDIKLAKQRIEGYRAFATKIW
NAARFCEMNGIAPRPDFDLATATLPLSRWILDAANTAVAEANAALEAFRFDDYAMACYRF
TWGGFCDWFLEFAKPVLLGPDGPEKEEVKGAAQHVLGVILRLLHPVMPYITEELWHRMGY
GAECSLIRETWPEAASVRDAAEARAELDWVVRLISEVRTVRSEMNVAPSITVPLLLAGAS
GESLARATRWEDAIKRLGRATEVRALEGDPPRGAVQAVVGEATIMLPLAEVIDLGAERAR
LSKERARIAAEADKTIAKLSSDVFVSRAPEEIVQEMRDRLEAQRAEVARLDAAMARIAG
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacaagtccttcgaccccgccgcgatcgaacagcgcctttataagggctgggaa
tcttccggcgccttctcggcgaaccctgcttcgccggcgaagcccttcaccatcatgatt
ccgccgcccaacgtgacggggtcgctgcatatcgggcatgcgctcgacaacacgctgcag
gacgtactgatccgctggcggcggatgcaggggcgcgatgcgctgtggcagccggggacc
gaccatgccggcatcgcgacgcagatggtggtggaacgcctgctggcgcagcagggcaat
gccgaccgccggaccatggggcgcgaggccttcatccagcgcgtgtgggactggaaggct
gagtcgggtgggaccatcacgcggcagctgcgccggctgggcgcctcgctggactggccg
cgcgaacgcttcaccatggacgagggcctgtccgaggcggtgcgcgaggtgttcgtgcgt
ctgtatcgggaaggcctgctgtaccgcgacaagcggctggtgaactgggatccgaagttc
cttaccgcgatctcggacctcgaggtcgagagcaaggaggtgaagggccacctgtggcac
ctgcgctatccggtcgagggcgagccgggtcgcttcctggtggtggcgaccacgcggccc
gagaccatgctcggcgacaccgcggtggcggtgcatccggaggatgcgcgcttccgcgac
ctggtgggcaagcgcgtgatcctgcctctgacggggcggtccattcccgtggtggcggat
gagtactccgacccggagaaggggtcgggcgcggtgaagatcaccccggcgcacgacttc
aacgatttcgacctgggcaagcggcatgacctgccgatgccctccgtactggacgcggaa
ggtcgcgtgatgctggaggagatcgcgacagggttcgtcgcggtcgagggcgtggcggac
ctcgacttcgtgcggagcctggcgggtcaggatcgcttcgcggcgcgcaaggcaatcgtc
gcccggctggaagaactggaactggtcgagaagatcgaaccgcacactcacgcggtacca
catggcgaccgctccggcgtgccgatcgaaccgcggctgaccatgcagtggtacgtcgac
gccaagacgctggccgcccccgcgatcaaggcggtcgagaccgggcagacggtgttcacg
cccaagcagtgggagaacaccttcttcgcctggatgcgcgacatccagccctggtgcgtg
tcgcggcaattgtggtggggccaccagatcccggcctggtatgcgccggatggcgaagtg
ttcgtcgcccatacggaagccgaggcgcgcgacctggcgcgcacgaaattcggtcgcgac
gtggacctggtgcgcgacgaggacgtgctggacacctggttcagttccgcgctgtggccg
ttcagcacgatcggctggccgcagaagacgcctgaactggcgaagtactatcccggcgat
gtgctggtgacgggcttcgacatcatcttcttctgggtcgcccgcatgatgatgatgggt
atccacttcatgggcgaagtgcccttcaagacggtctgcatccacggcctggtgcgcgac
gagaagggccagaagatgtcgaagtcgaaggggaatgtgctcgatcccctggaactggtc
gacgcgcatggcgcggatgcggtgcgcttcacgctgtgtgcactggccgggccggggcgc
gacatcaagctggcgaagcagcgcatcgagggctaccgcgccttcgccacgaaaatctgg
aacgcggcgcgcttctgcgagatgaacggcatcgcgccgcggccggatttcgacctggcc
accgccacgctgccgctgtcgcgctggatcctcgatgccgcgaacactgcggtggcggag
gccaatgccgcgctcgaggccttccgcttcgatgactacgccatggcctgctaccgcttc
acctggggcggcttctgcgactggttcctggaattcgcgaagcccgtgctgctcggtccc
gacggaccggagaaggaggaggtgaagggcgccgcgcagcatgtgctgggcgtgatccta
cgcctgctgcacccggtgatgccctacatcaccgaggagctgtggcaccgcatgggctat
ggcgcggagtgcagcctgatccgggaaacctggcccgaggccgcgagcgtgcgtgacgcc
gccgaggcgcgtgccgaactggactgggtggtgcgcctgatcagcgaggtccgcaccgtg
cgctccgagatgaacgtcgcaccgtcgatcaccgtgccgctgctgctggccggggcgtcg
ggcgaatcgctggcgcgcgcgacgcgctgggaggacgcgatcaagcgcctcggccgtgcg
actgaggtccgcgcgctggagggcgacccgccgcgcggcgccgtgcaggccgtggtgggc
gaggcgaccatcatgctgcccctggccgaggtgatcgacctcggcgccgagcgcgcgcgc
ctgtccaaggaacgcgcgcggattgcggccgaggccgacaagaccatcgcgaaactgtcg
agcgatgtcttcgtctcgcgcgcgccggaggagatcgtgcaggagatgcgcgaccggctg
gaggcccagcgggccgaggtggcgcggctcgatgccgcgatggcgcggatcgcgggctga
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