Roseomonas fluvialis: Rmf_28520
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Entry
Rmf_28520 CDS
T08992
Name
(GenBank) ATP-dependent DNA ligase
Organism
rfl
Roseomonas fluvialis
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
Motif
Other DBs
NCBI-ProteinID:
BDG72923
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Position
complement(2950914..2952521)
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AA seq
535 aa
AA seq
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MSLPAFAELLERLVFTPGRNAKLALLAQWFATQPDPERGIGLAALTDELVFSAAKPGVIR
ELGASRIDPELWRMSYDYVGDLAETLALVWQPRAGVNAPPPALSDIVQALQDTPKAEVPA
LIAGWLDTLDAGGRLALIKLVTGGLRVGVSARLARVALAEWSGQRVEDIEEVWHGVAWPY
APLFRWLEGQAERPDPRDQPIFRPLMLAHPLEAPDLAALHAPDWRAEWKWDGIRVQLTAG
PGGRRIWSRGGEDISGAFPEICAAMDFHAVLDGELLVVRENEVAPFADLQQRLNRKAPTA
KMQRDFPAAVRLYDLLFDAGEDLRPLPFDTRRARLESWHARISPPRMDLSALVPFDSLDT
LGRIRDGARAASIEGLMLKRADAPYVAGRTKGLWWKWKRDPLTVDAVLMYAQRGHGKRSS
FYSDYTFGVWRADGELVPIGKAYSGYTDDELAWLDKWIRNNTTNRFGPVREVERGIVFEV
AFDAAQRSTRHKSGVALRFPRIARIRRDKPPEEADRLETVEALIDTTLAERDRAG
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcccgccttcgccgaactgctcgaacgcctggtcttcacgccggggcgcaat
gcgaaactggcgctgctggcgcagtggttcgcgacgcaacccgaccccgagcgcggcatc
ggcctggccgcgctgacggacgaactggtgttctccgccgccaagcccggcgtgatccgt
gagctcggcgcatcgcgcatcgacccggaactctggcgcatgtcctacgactatgtcggg
gacctagccgagacgctggccctggtctggcagccgcgcgcgggcgtgaacgcaccgccc
ccggcgctgtcggacatcgtccaggcgctgcaggacacgcccaaggccgaggtgccggcg
ctgatcgccggctggctcgacacactcgacgccggcgggcggctcgcgctgatcaagctg
gtcaccggcgggttgcgcgtgggcgtctccgcacgccttgcgcgcgtggcgctggccgaa
tggtccggccagcgcgtcgaggatatcgaggaagtctggcacggtgtcgcctggccctac
gcgcccctgttccgctggctggaaggccaggccgagcgccccgacccgcgcgaccagccg
atcttccgcccgctgatgctcgcgcacccgctggaggcacccgacctcgcggccttgcac
gcgccggactggcgtgccgaatggaaatgggatggcatccgcgtgcagctcaccgccggt
cccggcgggcggcgcatctggtcgcgcggcggggaggatatctccggcgctttccccgaa
atctgcgccgcgatggatttccacgccgtgctcgacggcgaattgctggtggtgcgggag
aacgaggtcgcccccttcgccgacctccagcagcgcctcaaccgcaaggcgccgacggcc
aagatgcagcgcgacttccccgccgccgtgcgcctgtacgacctgctgtttgacgccggc
gaggacctgcgcccgctgcccttcgacacccgccgcgcacggctggaatcctggcacgcg
cgcatctcgccgccgcgcatggacctctcggcgctggtgcccttcgacagcctcgacacg
ctgggccgcatccgcgacggcgcccgcgcggcatcgatcgaggggctgatgctcaagcgc
gccgacgcgccctatgtggcgggccgcaccaagggcctgtggtggaagtggaagcgcgac
ccgctcaccgtcgatgccgtgctgatgtacgcccagcgcggccacggcaagcggtcgtcc
ttctattccgactacaccttcggcgtctggcgcgcggatggcgaattggtgccgatcggc
aaggcgtattccggctacacggatgacgaactcgcctggctcgacaagtggatcaggaac
aacaccaccaaccgcttcggcccggtgcgggaggtcgagcgcggcatcgtcttcgaagtc
gcttttgacgccgcgcagcgcagcacgcgccacaaatccggtgtggcccttcgcttcccg
cgcatcgcccgcatccgccgcgacaagccgcccgaggaagccgaccgcctggaaaccgtg
gaggcgctgatcgacaccacgcttgcggaacgcgaccgcgccgggtga
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