Roseomonas fluvialis: Rmf_32040
Help
Entry
Rmf_32040 CDS
T08992
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
rfl
Roseomonas fluvialis
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rfl01011
]
Rmf_32040
Enzymes [BR:
rfl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Rmf_32040
Peptidoglycan biosynthesis and degradation proteins [BR:
rfl01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Rmf_32040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
DUF3310
Motif
Other DBs
NCBI-ProteinID:
BDG73275
LinkDB
All DBs
Position
3291239..3293200
Genome browser
AA seq
653 aa
AA seq
DB search
MRRLMILGLLALPLPALSQPWAPDGARAAGRQALAAAGVGRYAEAESFAAAADPLAAKIV
LWMRLSNRAAPASAAELVAFLAENPDWPLPDAMTRRAEAALSADPDDALALRHFARSPAR
TLAGALRHAEALDRAGRGADARAVIRRGWAETAGDAFAEENALLRFTAALTEDDHWTRFD
RLAFARDLGGASRAAGRLTGARAAAANVRLALARDDDAALAARPTDIGWAYEHARLLRRR
DRDAEAAAAWAAAERLQSGLAGDAARAVWAERQVLARKLLRLGQEREAYRTAAAHGQAAP
GEARQEGEFLAGFIALRRLNDATAAERHFVALAQDSRSVITRARAGYWQGRALAARGDAA
GARARYAAAAELPVAFYGQLAALAMGENEAQLSQRVARAATPPVTPPRAADFTARELTRA
VLTLADLGDTRRARVFLLRLEDLANDGTDRMLAARLAAHIGRQDHAVWVARRAGAAGDML
LPIGWPTPYTPPVSQPEPAFIHAITRQESNFDTEAVSGANARGLMQLLPSTATLVARRLG
QPFNVAQLTASPEVNMRLGAAFLDEMLNRYGGTLPLAAAAYNAGPGRVDQWLGTYGDPRG
GDVDMIDWMEQIPFTETRNYVQRVIENVIVYRARDASAAAREHPLAPYLRAAR
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcctgatgatcctgggcctgctggccctgccgctccctgccctctcgcagccc
tgggcgcccgacggggcgcgtgccgccgggcgccaggcgctggccgccgcaggcgtcggg
cgatatgcggaggccgagagcttcgccgccgccgccgatccgctcgccgcgaagatcgtg
ctctggatgcgcctgtcgaatcgcgccgcgccggcctcggccgccgagctggtggccttc
ctggccgagaaccccgactggccgctgcccgatgccatgactcgccgcgccgaggccgcg
ctgtcggccgacccggacgatgcgctggcgctgcgccacttcgcccgcagcccggcgcgc
accctggccggcgccttgcgccatgccgaggcgctggaccgcgccgggcgcggtgcggat
gcccgcgccgtgatccgccgcggctgggcggagaccgccggcgacgccttcgcggaagaa
aacgcgctgctgcgcttcaccgcggcactgaccgaggacgatcactggacgcgcttcgac
cggctggccttcgcgcgggacctgggcggcgcgtcgcgcgcggccgggcggctgaccggc
gcgcgcgcggcagcggcgaatgtccgcctggccctggcccgcgacgacgacgccgcgctg
gccgcccgccccaccgatatcggctgggcctacgagcacgcccgcctgctgcgccggcgc
gaccgcgacgccgaggccgccgccgcctgggccgccgccgaacgcctgcagtcgggcctg
gccggcgatgccgcccgcgcggtctgggcggagcgccaggtgctcgcgcgcaagctgctg
cgcctggggcaggaacgcgaggcctatcgcaccgccgccgcgcatggccaggcggccccc
ggcgaggcccggcaggagggcgagttcctcgccggcttcatcgcgctgcgccggctgaac
gacgcgacggcggcggaacggcatttcgtggccctcgcgcaggacagccggtcggtcatc
acccgcgcgcgcgcggggtattggcaggggcgcgcgctggcggcgcggggcgatgccgcg
ggcgcacgggcgcgctacgcggcggcggccgaattgccggtggccttctatgggcagctg
gcggccctcgcgatgggggagaacgaggcgcagctctcccagcgcgtcgcgcgtgccgcg
acaccgccggtcacgccaccgcgcgcggcggacttcaccgcgcgggaactcacgcgcgcg
gtgctgacgctggccgatctgggcgatacgcggcgagcccgcgtgttcctgctgcggctc
gaggatctggcgaatgatggcacggaccggatgctggccgcgcggctggcggcgcatatc
ggccgccaggaccatgcggtgtgggtggcgcgtcgcgccggcgcggcgggggacatgctg
ctgccgatcggctggcccacgccctacaccccgccggtcagccagcccgagcccgccttc
atccacgccatcacgcggcaggagagcaacttcgacaccgaggctgtcagcggcgccaat
gcgcgcgggctgatgcagttgctgccctcgaccgccacgctggtggcgcgtcggctgggc
cagcccttcaacgtcgcgcagctgaccgcgagcccggaggtgaacatgcgcctgggggcc
gccttcctcgacgaaatgctgaaccgctatggcggcacgctgccgctggcggcggcggcc
tacaatgccgggccggggcgcgtggatcagtggctgggcacctatggcgatccgcgcggc
ggcgatgtcgacatgatcgactggatggaacagatccccttcaccgagacgcgcaactac
gtccagcgggtgatcgagaacgtcatcgtctatcgcgcgcgggatgcctcggcggcggcg
cgcgagcatccgcttgcaccctatctgcgagccgcccggtga
DBGET
integrated database retrieval system
