KEGG   Roseomonas fluvialis: Rmf_33350
Entry
Rmf_33350         CDS       T08992                                 
Symbol
impK
Name
(GenBank) cell envelope biogenesis protein OmpA
  KO
K11892  type VI secretion system protein ImpK
Organism
rfl  Roseomonas fluvialis
Pathway
rfl03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rfl00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Rmf_33350 (impK)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rfl02044]
    Rmf_33350 (impK)
Secretion system [BR:rfl02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Rmf_33350 (impK)
SSDB
Motif
Pfam: DotU OmpA SinI
Other DBs
NCBI-ProteinID: BDG73406
LinkDB
Position
complement(3451419..3452852)
AA seq 477 aa
MSDNPFAEPDDSDRTVVRGPGGAAPRPVPAAPAGQRPPPPVGGYGALPTGAGVAPAGRAE
SAPRLAGEAEALPKIGIGPLAAAAQPLLDLLGRLSNAGMTAPPQGEELRERALRAFRQFE
TDARDLGISAEQVRAAHYILCASLDDVVLSYNWGQASVWSVQSLVATFHQEVKSGDRFFD
VLAGMQKDPGRWKDALEVAYLCLALGFQGRYRLSPRGASELERIREGLYQLLVQVRAPWE
RELSPHWKGVDAPHRGPRRGIPAWVAACVAVFALGMGYAWLANAMNENSDGLYARMAALP
PGAFPEIVRPAPPRPPAPPPPPPANVPPPPPDFLATLQQFLKPEIDQGLLTVFGDGRSIT
VRLKGTGMFASGSATLEPRFVPILQRVGQGLRTEPGRVQVIGHSDNQPIRTVRFPSNFQL
SAARAEAAAAVISAATGDASRFTTEGRADAEPIADNRTAEGREANRRIEVILLRGTR
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgagcgacaatcccttcgccgaacccgacgacagcgaccgcacggtggtgcgcggcccg
gggggtgcggcgccgcgcccggtgccggccgcccccgcgggccagcgcccgccgccgccg
gtcggcggctatggcgcgctgcccaccggcgccggcgtcgcccccgccgggcgcgcggaa
tccgccccgcgcttggccggcgaggccgaagccctgcccaagatcggcatcggcccgctc
gccgccgccgcgcagccgctgctcgacctgctcggccgcttgtccaacgcgggcatgacc
gcaccgccgcagggcgaggaactgcgcgagcgcgcgctgcgcgccttccggcagttcgag
accgatgcccgtgacctcggcatcagcgccgagcaggtgcgcgcggcacactacatcctg
tgcgccagcctcgatgacgtggtgctgtcctacaactggggccaggcgagcgtctggtcg
gtgcagtccttggtcgcgaccttccaccaggaagtgaagtcgggcgaccgcttcttcgac
gtgctggccggcatgcagaaggaccccgggcgctggaaggacgcgctcgaggtcgcctac
ctctgtctcgcgctgggcttccaggggcgctaccggctttcgccgcgcggggcctcggag
ctcgagcgcatccgcgaggggctgtatcagctgctggtgcaggtgcgcgcgccgtgggaa
cgcgaattgtcgccccactggaagggcgtggatgcgccgcatcgcggcccgcgccgcggc
atcccggcctgggtcgcggcctgcgtggcggtcttcgcgctgggcatgggctatgcgtgg
ctggcgaatgccatgaacgagaactccgacgggctctatgcgcgcatggccgcgctgccg
cccggcgccttccccgagatcgtgcgccccgcgccgccgcgcccacccgcgccgccgccg
ccgccgcccgccaatgtcccgccgccgccacccgacttcctggccacgctgcagcaattc
ctgaagcccgagatcgaccagggactgctgacagtcttcggcgacgggcggtccattacc
gtgcgcctgaagggcacgggcatgttcgcctccggctccgccacgctcgaaccccgcttc
gtcccgatcctgcagcgggtggggcaggggctgcgcactgaaccggggcgcgtgcaggtg
atcggccattccgacaaccagccgatccgcaccgtgcgcttcccgtcgaatttccagctc
tcggccgcgcgggccgaggccgccgccgcggtcatctcggccgcgacgggcgatgcgtcg
cgcttcaccaccgaaggccgcgcggatgccgagccgatcgccgacaaccgcaccgccgaa
gggcgcgaggcgaaccggcgcatcgaggtcatcctgctgcgagggacacgctga

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