Roseomonas fluvialis: Rmf_35090
Help
Entry
Rmf_35090 CDS
T08992
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
rfl
Roseomonas fluvialis
Pathway
rfl02020
Two-component system
rfl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rmf_35090
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Rmf_35090
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rfl02022
]
Rmf_35090
02035 Bacterial motility proteins [BR:
rfl02035
]
Rmf_35090
Two-component system [BR:
rfl02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
Rmf_35090
Bacterial motility proteins [BR:
rfl02035
]
Flagellar system
Flagellar assembly proteins
Others
Rmf_35090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Response_reg
AAA_16
AAA
MCM
AAA_3
HTH_50
nSTAND3
HTH_30
AAA_19
HTH_Tnp_ISL3
AAA_2
HTH_28
TadZ_N
HTH_23
Eno-Rase_NADH_b
MerR
ADH_zinc_N
AAA_7
Motif
Other DBs
NCBI-ProteinID:
BDG73580
LinkDB
All DBs
Position
3635732..3637117
Genome browser
AA seq
461 aa
AA seq
DB search
MARVLVIGSLEAELGIAARIAAARGARIATAEGAAAGLSRLRAEGADLVLCDVQHDVGWL
VAQLTAERIACPVIACGRPNDADAAVRAIRAGAKDFLPLPPDADLIAAMLQAVAGEPDRP
VVQDPGMTALMARAEQVARAEASVLIMGESGTGKEVLARHIHAASRRARGPFVALNCAAL
PEALLESELFGHEKGAFSGAVASRKGKFEQAEGGTLLLDEIGEMDPRLQAKILRAIQERE
IDRLGGTAPVKVDVRILAATHRDLATEVARGRFREDLYFRLAVVRLRIPALRERRGDILP
LAHHFAERYARANGLPVRALSPAAEALLLAHPWPGNVRELENTLHRAVLLAEGPGIGPDA
IDLLEAAPTLQAEAAAPSASPTSSAAVPPVTALVGRRVEEVERDLILETLSHCLGNRTRA
AEMLGISIRTLRNKLHEYRAAGVTVPPVPGQPPYALPASGA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgtgctcgtcatcgggtcgctggaggcggaactcggcattgccgcgcggatc
gccgccgcgcgcggcgcgcgcatcgccaccgccgagggcgcggccgccggcctgtcgcgc
ctgcgcgccgagggtgccgacctggtgctgtgcgacgtgcagcacgacgtcggctggctg
gtcgcgcagctcacggccgaacgcatcgcctgcccggtgatcgcctgcgggcggcccaac
gacgccgatgccgccgtgcgcgccatccgcgccggtgcgaaggacttcctgccgctgccg
ccggatgccgacctgatcgccgccatgttgcaggcggtggcgggcgaacccgaccgtccg
gtggtgcaggacccgggcatgaccgcgctcatggcgcgcgccgaacaggtcgcgcgcgcc
gaggcgtcggtcctgatcatgggcgagagcggcaccggcaaggaggtgctggcgcgccac
atccacgccgcgtcgcgccgcgcgcgcgggcccttcgtggcgctgaactgcgcggccctg
ccggaagccctgctggaatccgaattgttcggccacgagaagggcgccttcagcggcgcc
gtcgcatcgcgcaagggcaagttcgaacaggccgagggcggtacgctgctgctggacgaa
atcggtgagatggacccacgcctgcaggccaagatcctgcgtgccatccaggaacgcgag
atcgaccggctcggcggcaccgcgcccgtcaaggtcgatgtgcgcatcctggccgcgacg
catcgcgacctcgccaccgaagtggcgcgcgggcggttccgcgaagacctgtacttccgc
ctggccgtggtgcgcctgcgcatccccgcgctgcgcgaacggcgcggggacatcctgccg
ctggcgcaccacttcgccgaacgctacgcgcgcgccaatggcctgcccgtacgtgcgctg
tcgccggccgccgaggcgctgctgctggcccacccctggccgggcaatgtgcgcgagctc
gagaacacgctgcaccgtgccgtcctgctggccgaaggccccggcatcgggccggatgcc
atcgacctgctggaggcggcacccacgctgcaggccgaagccgccgcgccgtctgcctcg
cccacctcgtccgccgccgtgccgccggtcacggccctggtgggccgccgtgtcgaggaa
gtcgagcgggacctgatcctcgagacgctctcgcactgcctgggcaaccgcacccgcgcg
gcggagatgctcggcatctcgatccgcacgctgcgcaacaagctgcatgaataccgcgcg
gccggcgtgaccgtgccacccgtgcccgggcagccaccctatgcgctgccggcctctggc
gcgtga
DBGET
integrated database retrieval system
