Roseomonas fluvialis: Rmf_36390
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Entry
Rmf_36390 CDS
T08992
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (decarboxylating)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl00260
Glycine, serine and threonine metabolism
rfl00630
Glyoxylate and dicarboxylate metabolism
rfl00670
One carbon pool by folate
rfl00785
Lipoic acid metabolism
rfl01100
Metabolic pathways
rfl01110
Biosynthesis of secondary metabolites
rfl01200
Carbon metabolism
Module
rfl_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Rmf_36390 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Rmf_36390 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Rmf_36390 (gcvP)
00670 One carbon pool by folate
Rmf_36390 (gcvP)
Enzymes [BR:
rfl01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
Rmf_36390 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Methyltransf_25
Motif
Other DBs
NCBI-ProteinID:
BDG73710
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All DBs
Position
complement(3791528..3794443)
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AA seq
971 aa
AA seq
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MNSPATLLELEEHDEFARRHIGPSPDEIAAMLTVVGAESLADLAARTVPGAIRGADLSAL
PPPVTEAEVIAELRELAGRNRADIKSLIGLGYHGTLVPPVILRNVLENPGWYTAYTPYQA
EIAQGRLEALVNFQTMVCDLAGLPVANASLLDEGTAVAEAMAMAHGATRGKSDAIVVAAD
LHPQTLAVVRTRAEPHGWRVHVAAVADIATACAAEKPFALVLQYPGTTGEVRDLTAEIAA
AKAAGGLAIVAADPLSLTLLKPPGEMGADIVVGSTQRFGVPMGYGGPHAAFMAVTDPLKR
LMPGRLVGVSVDAAGAPAMRLALQTREQHIRREKATSNICTAQVLLAVMAGMYAVWHGPE
GLRRIARRVRLQARLLGDAAQKAGLTLRHEGFFDTIAIEAGARADTLMTAALRRGFNLRR
VDAGCVAVAMDETVTRADLDVLCAVVAEVTGTAPASLGMLSPAGDLPESVRRLSPFMTAA
VFDSHHSEHGMLRYLKSLEDKDVALNRSMIPLGSCTMKLNATAEMIPVTFPGFGNIHPFA
PVDQAAGYIAMIRQLESWLAKITGFAAVSLQPNAGSQGEYAGLLAIRAYHQARGEGHRNI
CLIPSSAHGTNPASAVMAGMQVVVVGCDRDGNVDVADLHTKIAQHGANLSALMVTYPSTH
GVFEAEIKEICAAVHAAGGQVYMDGANMNAQVGLTSPGGIGADVCHLNLHKTFCIPHGGG
GPGVGPIGVAAHLAPHLPNHPMLAEAGPATGFGPVSAAPFGSASILPISYAYIRMMGAEG
LTRATEVAILSANYMAKRLEAHFPVLYRGANGMVAHECILDCRGFQQGGGVLVEDIAKRL
QDYGFHAPTMSWPVAGTLMVEPTESEPKAELDRFIDAMVAIRAEIRAVEQGRMDKADNPL
KNAPHTAAEVIADAWSHPYTREQAAFPLPFVKARKYWPPVKRVDNVYGDRNLVCSCAPLE
AYANQHQIAAE
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgaacagccccgccacgctcctcgagctcgaggaacacgacgaattcgcccgccgccac
atcggcccgtcgccggacgagatcgcggccatgctgacggtggtcggcgcggagagcctc
gctgaccttgccgcgcgcaccgtgccgggcgcgatccgcggcgcggacctgtccgcgctg
ccgccgccggtgacggaagcggaagtcatcgccgaactgcgcgaactggcggggcgcaac
cgcgccgacatcaagtcgctgatcgggctcggctaccacggcacgctggtgccgcccgtc
atcctgcgcaacgtgttggagaatcccggctggtatacggcctacacgccctatcaggcc
gagatcgcgcaggggcggctcgaagcgctggtgaatttccagaccatggtctgcgacctt
gcgggcctgccggtggcgaatgcctcgctgctcgatgaaggcaccgcggtcgctgaggca
atggcgatggcgcatggcgcgacgcgcggcaagtccgacgcgatcgtggtcgccgccgac
ctccatccgcagacgctcgcggtggtgcggacgcgcgcggagccgcatggttggcgcgtg
catgtcgcggccgtagccgacatcgcgacggcttgcgctgccgaaaagcccttcgcgctg
gtgctgcaataccccggcaccaccggcgaggtgcgcgatctgaccgccgagatcgccgcg
gcgaaggctgctggcggcctcgcgatcgtcgcggccgatccactgtcgctcacactgctg
aagccgccgggcgagatgggcgccgacatcgtcgtgggcagcacgcagcgcttcggcgtg
cccatgggctatggcggcccgcacgcggccttcatggcggtgaccgacccgctgaagcgc
ctcatgcccgggcgcctggtgggtgtgtcggtggatgccgccggcgcgccagccatgcgc
ctcgcgctgcagacacgcgaacagcacatccgccgtgagaaggcgacgtcgaacatctgc
accgcgcaagtgctgctggcggtgatggccggcatgtacgcggtgtggcacggccctgaa
gggctgcggcgcatcgcgcggcgcgtgcgcctgcaggcgcggctgctcggcgatgccgcg
cagaaggcggggctgacgctgcgccacgaaggcttcttcgataccatcgcgatcgaagct
ggtgcgcgcgccgatacgctgatgaccgccgcacttcgccgcggcttcaacctgcgccgc
gtggatgccggctgcgtcgcggtggcgatggacgagacggtgacgcgcgccgacctcgac
gtgctgtgcgcggtggtggcggaagtcacgggcacggcgccggcatccctgggcatgctg
tcaccggccggcgacctgccggagagcgtgcggcggctcagccccttcatgaccgccgcg
gtcttcgacagccaccattccgaacacgggatgctgcgctacctgaagtcgctggaagac
aaggatgtcgcgctcaaccgcagcatgatcccgctcgggtcctgcaccatgaagctcaac
gcgacggcggagatgatcccggtcaccttcccgggcttcggcaacatccatcccttcgcg
ccggtggaccaggcggcgggctatatcgcgatgatccgccagctggaatcctggctggcc
aagatcaccggcttcgccgcggtgtcgctgcagcccaatgccggcagccagggcgagtat
gccgggctgctcgcgatccgcgcctaccaccaggcgcgcggggaggggcatcgcaacatc
tgcctcatcccgtccagcgcgcatggcaccaacccggcctcggccgtgatggcgggcatg
caggtcgtggtggtgggctgcgatcgcgacggcaatgtcgatgtcgcggacctgcacacc
aagatcgcgcagcatggcgcgaacctctcggcgctgatggtgacttatccgtccacccac
ggcgtgttcgaagccgagatcaaggagatctgcgccgcggtgcatgccgccggtgggcag
gtctacatggatggcgcgaacatgaacgcgcaggtgggcctgaccagcccgggcggcatc
ggcgcagatgtctgccacctcaacctgcacaagaccttctgcatcccgcacggcggcggc
gggcctggcgtggggccgatcggcgtggcggcgcacctcgcgccgcatctgccgaatcac
cccatgctggccgaagccggcccggccacgggcttcgggccggtcagtgcggcacccttc
ggcagcgcgtccatcctgccgatcagctacgcctacatccgcatgatgggtgccgaaggc
ctcacgcgcgcgaccgaggtcgcgatcctgtccgccaactacatggcgaagcggctggaa
gcgcatttcccggtgctctaccgcggtgcgaacggcatggtcgcgcatgagtgcatcctc
gactgccgcggcttccagcagggcggcggcgtcctggtcgaggacatcgctaagcgcctg
caggattacggcttccacgcgccgaccatgtcctggcccgtggccggcacgctgatggtc
gaaccaaccgagagcgagccgaaggcggaactggaccgcttcatcgacgccatggtggcg
atccgcgccgagatccgtgccgtcgaacaaggtcgcatggacaaggccgacaacccgctg
aagaacgcgccgcacacggccgcggaagtcatcgctgatgcctggtcgcacccctacacc
cgcgaacaggccgccttcccgctgcccttcgtcaaggcgcgcaagtactggccgccggtg
aagcgcgtcgacaatgtctatggcgaccgcaacctggtgtgttcctgtgcgccgctcgag
gcctacgcgaaccagcaccagatcgcggcggaatga
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