Roseomonas fluvialis: Rmf_36970
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Entry
Rmf_36970 CDS
T08992
Symbol
groL5
Name
(GenBank) 60 kDa chaperonin 5
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rmf_36970 (groL5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfl03019
]
Rmf_36970 (groL5)
03110 Chaperones and folding catalysts [BR:
rfl03110
]
Rmf_36970 (groL5)
03029 Mitochondrial biogenesis [BR:
rfl03029
]
Rmf_36970 (groL5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rfl04147
]
Rmf_36970 (groL5)
Enzymes [BR:
rfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Rmf_36970 (groL5)
Messenger RNA biogenesis [BR:
rfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Rmf_36970 (groL5)
Chaperones and folding catalysts [BR:
rfl03110
]
Heat shock proteins
HSP60 / Chaperonin
Rmf_36970 (groL5)
Mitochondrial biogenesis [BR:
rfl03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Rmf_36970 (groL5)
Exosome [BR:
rfl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Rmf_36970 (groL5)
Exosomal proteins of other body fluids (saliva and urine)
Rmf_36970 (groL5)
Exosomal proteins of breast cancer cells
Rmf_36970 (groL5)
Exosomal proteins of colorectal cancer cells
Rmf_36970 (groL5)
Exosomal proteins of bladder cancer cells
Rmf_36970 (groL5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BDG73768
UniProt:
A0ABN6P549
LinkDB
All DBs
Position
complement(3848594..3850240)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGASARERMIRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELADKFENMGAQMVREVASKTNDLAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGI
DKAVTEIVKDLESKTRKISTSAEVAQVGSISANGETEIGEMIAKAMEKVGNEGVITVEEA
KSIQTELDVVEGMQFDRGYVSPYFITNAEKMIAEMDQPYILIFEKKLSGLQPMLPLLETV
VQSGRPLVIIAEDVEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTGGEV
ISEDLGIKLENVTLAMLGKAKMVRIEKENTTIVDGAGEKTAITGRCEQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGSTEVEVKERKDRVDDALHATRAAVEEGIVPGGGVALL
RASQKLAGLKGANNDEQVGIEIIRRAIQAPLKQIAENAGKDGAVVAGEVLRTDTYVFGYD
AQKDEYKDLVAAGIIDPTKVVRTALQDAASVASLLITTEAMVAERPAKPSAPAGGGGGDM
GGMGGMDF
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaggacgtgaagttcggcgcttcggcgcgcgagcggatgattcgcggcgtg
gatatcctggccgacgccgtgaaggtgacgctgggccccaaaggccgcaacgtcgtgatc
gacaagtccttcggtgccccgcgcatcacgaaggacggcgtgaccgtcgcgaaggaaatc
gagctcgccgacaagttcgagaacatgggcgcccagatggtgcgcgaagtggcctcgaag
acgaacgacctggccggtgacggcaccaccaccgcgaccgtgctggcccaggccatcgtg
cgcgagggtgcgaaggcggtcgccgcgggcatgaacccgatggacctgaagcgcggcatc
gacaaggccgtgaccgagatcgtgaaggacctcgagtccaagacgcgcaagatctcgacc
tcggccgaagtggcgcaggtcggctcgatctccgccaacggcgagaccgagatcggcgag
atgatcgccaaggcgatggagaaggtcggcaacgagggtgtcatcaccgtcgaggaagcc
aagtccatccagaccgagctcgacgtcgtcgagggcatgcagttcgatcgcggctacgtc
tccccgtatttcatcacgaatgcggagaagatgattgccgagatggatcagccctacatc
ctgatcttcgagaagaagctgtccggcctccagccgatgctgccgctgctcgagaccgtg
gtgcagtccggccgtccgctggtgatcatcgccgaggacgtcgagggcgaggcgctggcc
accctggtggtgaacaagctgcgcggcggcctgaaggtcgcggccgtgaaggcgcctggc
ttcggtgatcgccgcaaggcgatgctggaggacatcgcgatcctgacgggcggcgaggtc
atctccgaagacctcggcatcaagctcgagaacgtgacgctcgccatgctcggcaaggcc
aagatggtccggatcgagaaggagaacaccacgatcgtcgacggtgccggcgagaagacc
gccatcaccggccgctgcgagcagatcaaggcgcagatcgaggagaccacctcggactac
gaccgcgagaagctccaggagcgcctggcgaagctggccggcggcgtcgccgtcatccgc
gtcggcggcagcaccgaagtggaagtgaaggagcgcaaggaccgcgtggacgacgcgctg
cacgcgacccgcgccgcggtcgaggaaggcatcgtccccggtggtggcgtggcgctgctg
cgcgcctcgcagaagctggccggcctcaagggcgccaacaacgatgagcaggtggggatc
gagatcatccgccgcgccatccaggccccgctgaagcagatcgccgagaacgccggcaag
gacggcgcggtggtcgcgggcgaagtgctgcgcaccgacacctacgtgttcggctacgac
gcccagaaggacgagtacaaggatctggtggccgccggcatcatcgacccgaccaaggtc
gtgcgcacggcgctgcaggatgccgcttcggtggcgtcgctgctgatcaccaccgaggcg
atggtcgccgagcgtcccgcgaagccgtcggccccggccggcggtggcggcggcgacatg
ggcggcatgggcggcatggacttctaa
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integrated database retrieval system
