Roseomonas fluvialis: Rmf_37030
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Entry
Rmf_37030 CDS
T08992
Name
(GenBank) PAS domain-containing sensor histidine kinase
Organism
rfl
Roseomonas fluvialis
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Gene cluster
GFIT
Motif
Pfam:
PAS_7
HATPase_c
PAS_4
PAS
HisKA
PAS_8
Extensin-like_C
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
BDG73774
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Position
3854165..3856807
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AA seq
880 aa
AA seq
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MTREDAALRAIEALPHAMLVMDGAERLVLANAALWGEAGADPARFPPGTSLRDILRLFAF
RGLLGAGDPAVLAEDALALDRSQFLLRHQRTADGARLSEVTSLPLPGGGFAICSVDITAL
TRAEAAARARASLLERVLNAQRGGVALFDPDHRLMLHNPAYRRHSGATPEMLAGRPTLED
LVAQLDRAGEFRATRARAHLRDILAADRRQPRMSQRERADGSIMRFTSTPEPDGGFLLQS
EEVTDLRRAEDDARRRAAILDGVLEALPHGICVWGPDQRVALFNGAYTRLMEGAPLQVGD
TLEDVIHRRAAAGEYGPGDVSAVIAREKARDLSRPQERRRQRANGTALDIRTAPLPDGGH
ISVVTDITALWQAEEEARRRASLLETAMGSMRHGLVVYGPDRRVVAANALASTLAGHEPG
DIRPGRSLDELVDSLHASGRLGPEPLAARLAGDARDLDRSRPHRVRRTTPEGRVLEVSSD
PTPEGGFIVTHVDITALAQAEAEALSRAGILQVMLDNTQHGICLFDAQGHIVAVNALAAR
MCGLAPEQMAPGRHILQVRDDQVAAGEFGPPEQVARFIAIRPDDPWRGPERYVRRRPDGS
MLEITTAPTPDGGFVRTYSDVTEDRRVRDELERARAAAEAGSEAKSRFLATMSHELRTPL
SAVIGYAEALMGQPAPAQVAEFADAVRQAGRQLLGLIDDILDVARAGGPDAALGRAPVDV
AALALALAEAAQAEADAAGVQLAVDAPPELPAARVDERRLRRVLSALLGNAVKFTPAEGS
VRLVLRASGAGGLDIAVVDTGIGMAPEDIPRAFEPFTQLDSSHARHFPGSGLGLHLARML
AEAMGATLTLDSSPGAGTTATLRLPPGITTSVVQTTQETT
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcgaggacgccgcgctcagggccatcgaggccctgccccacgccatgctggtc
atggatggggcggagcggctggtgctcgccaatgccgcgttgtggggcgaggccggcgcc
gatcccgcccgcttcccgcccggcacctcattgcgcgacatcctgcgcctgttcgccttc
cgcgggctgctcggcgccggcgacccggccgtgctggccgaggacgcgctggcgctggac
cgcagccagttcctgctgcgccaccagcgcaccgccgacggcgcgcgcctgtccgaggtc
acaagcctgccgctgccgggcggcggcttcgccatctgctcggtcgacatcaccgcgctg
acgcgggccgaggccgccgcgcgcgcccgcgccagcctgctcgaacgggtgctgaacgcg
caacgcggcggcgtcgcgctgttcgacccggaccaccgcctgatgctgcacaaccccgcc
tatcgccgccattccggcgccacgcccgagatgctggccggccgcccgacgctcgaggac
ctggtggcgcagctcgaccgtgccggcgaattccgcgccacccgcgcgcgggcgcatctg
cgcgacatcctcgccgccgatcgccgccagccgcgcatgtcgcagcgcgagcgcgccgat
ggcagcatcatgcgcttcaccagcacccccgaacccgatggcggcttcctgctgcaatcc
gaggaggtgaccgacctgcgccgggccgaggacgacgcccgccgccgcgccgccatcctg
gacggggtgctggaagcgctgccgcacggcatctgcgtctggggcccggaccagcgcgtg
gcgttattcaacggcgcctacacccgcctgatggaaggcgcgccgctgcaggtcggcgac
acgctcgaggatgtcatccaccgccgcgccgccgccggcgaatatggccccggcgacgtg
tcggcggtgatcgcgcgcgagaaggcgcgcgacctgtcgcgcccgcaggaacgccggcgc
cagcgcgccaacggcaccgcgctcgatatccgcacggcgccgctgcccgatggcgggcac
atctcggtcgtcaccgacatcacggcgctctggcaggccgaggaggaagcacgccgccgc
gcctcgttgctcgaaaccgcgatgggctcgatgcgccacggcctcgtggtctatgggccc
gaccggcgcgtggtggcggcgaatgcgctggccagcacgctcgccggacacgaaccgggg
gatatccggccgggccgctcgctcgacgagttggtcgattcactgcacgcgagcgggcgc
ctggggccggagccgctggcggcgcgcctggccggcgatgcccgcgacctcgatcggtcg
cgcccgcaccgggtgcgccgcaccacgcccgagggccgcgtgctcgaggtctcctccgac
cccacgcccgaaggcggcttcatcgtcacccatgtggacatcaccgctctcgcgcaggcc
gaggccgaggcgctgagccgcgcgggcatcctgcaggtgatgctcgacaacacccagcac
ggcatctgcctgttcgacgcgcagggccacatcgtcgcggtcaatgcgctagccgcgcgc
atgtgcggcctggcccctgagcagatggcgccgggccgccacatcctgcaggtgcgcgac
gaccaggtcgccgccggcgaattcggcccgcccgagcaggtcgcccgcttcatcgcgatc
cgccccgacgatccctggcgcggccccgagcgctacgtgcgccgccgccccgatggctcc
atgctcgagatcaccaccgcccccacgcccgatggcggtttcgtgcgcacctattccgac
gtcaccgaggaccgccgcgtgcgcgacgagctggaacgcgcgcgcgccgccgcggaggcc
ggcagcgaggcgaagtcccgcttcctggccaccatgagccacgaactgcgcacgccgctc
tcggccgtgatcggctatgccgaggccctgatgggccagcccgcccccgcgcaggtcgcg
gaattcgccgacgccgtgcgccaggccggccgccagctgctcggcctgatcgacgacatc
ctggacgtggcgcgcgccggcgggccggatgcggcgctggggcgcgcgccggtcgatgtc
gcggcgctggcgctggccctcgccgaggccgcgcaggccgaggccgacgcggcgggcgtg
cagctcgcggtcgatgccccgccggagctgcccgccgcgcgggtggatgaacgccgactg
cgacgcgtgctctcggcgctgctcggcaacgccgtaaagttcacgcctgcggagggcagc
gtgcgcctggtgctgcgggcctccggcgcgggcggactcgacatcgccgtggtggatacc
ggcatcggcatggcgccggaggatatcccgcgcgccttcgaacccttcacccagctcgat
tcctcccatgcgcggcattttccgggctcggggctcgggctgcacctggcgcgcatgctg
gcggaagcgatgggggcgacgctaacgctcgacagcagccccggtgcgggcaccacggcc
accctgcgcctgccgcccggcatcaccacatcggtggtgcaaacgacccaggagacgaca
tga
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