KEGG   Roseomonas fluvialis: Rmf_37360
Entry
Rmf_37360         CDS       T08992                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
rfl  Roseomonas fluvialis
Brite
KEGG Orthology (KO) [BR:rfl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rfl03016]
    Rmf_37360 (rnd)
Enzymes [BR:rfl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     Rmf_37360 (rnd)
Transfer RNA biogenesis [BR:rfl03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    Rmf_37360 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-ProteinID: BDG73807
LinkDB
Position
3887702..3888889
AA seq 395 aa
MSRRPAAAAEPTPVLITETEALAALCARLRSEAFVTVDTEFMRERTYWPELCLVQLAGET
EVAEVDALAPGLDLAPLGELLADPAVVKVFHAARQDVEIFLLKFGAVPTPLFDTQIAAMV
AGFGDQVSYDGLCRSLAGVQIDKAHRFSDWSARPLSAAQLAYAAADVTHLRKIYTALDAK
LRREGRLAWVAEEMGALADPATYLTDPESAWERLRPRTTNRRFLGVLQAVTAWREREAQR
INIPRQRLVKDETLLEIAATTPETAADLARARGISEGFAKGRSGIGLLAAVKAGKELADE
ALPEAPKDRAGPPASPALVALLKVLLAAKSEEHHVAPKLLASSDDLDRLATGDDAEVPAL
HGWRRDVFGDAALALKAGRLALGVDGKRVKLIPAG
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgagtcgccgccccgctgccgccgccgaacccacccccgtcctgatcaccgagaccgag
gccctggccgcgctctgcgcccgcctgcgcagcgaggccttcgtcacggtcgacaccgaa
ttcatgcgcgaacgcacctactggccggaactctgcctggtgcagctcgccggcgagacc
gaggtcgcggaagtcgatgccctggcgccgggcctggacctggcgccgctcggcgaattg
ctggccgaccccgccgtggtgaaggtgttccacgccgcccggcaggatgtggagatcttc
ctgctgaaattcggcgccgtgccgacgccgctgttcgacacgcagatcgccgccatggtc
gcgggcttcggcgaccaggtgtcgtatgacgggctgtgccggtcgctggccggcgtgcag
atcgacaaggcgcaccggttcagcgactggtcggcacgaccgctgtcggccgcgcagctc
gcctacgccgcggccgatgtgacgcatttgcgcaagatctacaccgcgctcgatgccaag
ctgcggcgcgaggggcgcctcgcctgggtggcggaggaaatgggcgcgctggccgacccg
gccacctacctcaccgaccccgagagtgcctgggaacgcctgcgcccgcgcaccacgaac
cggcgcttcctgggcgtgctgcaggccgtgaccgcgtggcgcgaacgcgaggcgcagcgc
atcaacatcccgcgccagcgcctggtgaaggacgagacgctgctcgagatcgcggccacc
acgccggaaaccgcggccgacctggcgcgcgcgcgcggcatctcggaaggcttcgccaag
gggaggtccgggatcgggctgctcgccgcagtgaaggccgggaaggaactggccgacgag
gctctgcccgaggcgccgaaggaccgcgccgggccaccggcctcccccgcactggtcgcg
ctgctgaaggtgctgctggcggcgaagagcgaggaacaccacgtcgcgccgaaactgctc
gccagcagcgacgacctcgaccgcctggccaccggcgacgacgccgaagtgcccgccctg
cacggctggcgccgcgacgtgttcggcgacgcagccctggccctgaaggccggacgcctg
gcgctgggcgtggacgggaaacgggtcaagctgatcccggcggggtga

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