KEGG   Roseomonas fluvialis: Rmf_43540
Entry
Rmf_43540         CDS       T08992                                 
Symbol
trbB_2
Name
(GenBank) P-type conjugative transfer ATPase TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
rfl  Roseomonas fluvialis
Pathway
rfl02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rfl00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Rmf_43540 (trbB_2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rfl02044]
    Rmf_43540 (trbB_2)
Enzymes [BR:rfl01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Rmf_43540 (trbB_2)
Secretion system [BR:rfl02044]
 Type IV secretion system
  Trb secretion system protein
   Rmf_43540 (trbB_2)
SSDB
Motif
Pfam: T2SSE Zeta_toxin AAA_16 AAA_28 DEAD TrwB_AAD_bind FtsK_SpoIIIE AAA_25 GTP_EFTU AAA_7 nSTAND3 AAA_19 AAA_30 Mg_chelatase HerA_C ABC_tran ATPase AAA_29 RecA ABC_ATPase
Other DBs
NCBI-ProteinID: BDG74425
LinkDB
Position
4539950..4540918
AA seq 322 aa
MSLHPLKAETTARGARMLRTAFGPGIAGWLEDPAVVEVMLNPDGRLWIDRLAGGLADTGQ
CLAFADGERIIRLVAHHVGAEVHADRPCVSAELPETGERFEGLLPPVVAAPAFAIRKPAV
AVFTLVDYVAAGIMTAGQAIALRIAVAERRNILVAGGTSTGKTTLTNALLAEVAGECGRV
VLIEDTRELQCRAPNLVALRTKDGVASLSELVRRALRLRPDRIPIGEVRGAEALDLLKAW
GTGHPGGIGTIHAGSALGALRRLEQLIQEAVVTVPRALIAETIDVIAVLAGRGADRRLTE
LAQVHGLTATGDYDLTPTGDTP
NT seq 969 nt   +upstreamnt  +downstreamnt
atgtcgctgcatccgctcaaggccgagacgaccgcgcgtggcgcgcgcatgctgcgcacg
gcgttcggtcccggcatcgcgggatggctcgaagacccagccgtcgtcgaggtgatgctg
aatcccgacggtcggctctggatcgaccgtctcgcgggtggcctcgccgacaccggccag
tgcctggccttcgccgacggagagcgcatcatccgcctcgtcgcgcatcatgtcggcgcg
gaggtgcatgcggaccgcccctgcgtctcggcggagctgcccgagacgggtgagcgcttc
gagggcctgctcccgcccgttgtcgcggcccccgccttcgcgatccgcaagcccgccgtc
gccgtcttcacgctggtggactacgtcgccgccggcatcatgacggccgggcaggccatc
gcgctgcgcatcgcggttgcggagcgccgcaacatcctcgtcgccggcggcacgtcgacc
ggcaagaccacgctgaccaacgcccttctcgccgaggtcgccggtgagtgcggccgcgtc
gtgctgatcgaggacacgcgcgagctccagtgccgcgcaccgaacttggtcgcgctgcgc
accaaggacggcgtcgcctcgctctccgaactcgtccgccgcgcgctgcgccttcgcccc
gaccgcatcccgatcggcgaggtgcgcggcgcggaggcgctcgacctgctcaaggcgtgg
ggcaccggccatcccggcggcatcggcaccatccatgccggctccgcgctcggcgcgctg
cgccgcctcgagcagctgatccaggaagccgtcgtcaccgtcccgcgcgcgctgatcgcc
gagacgatcgacgtcatcgccgtgctcgccggccgcggcgccgaccgccgcctcaccgaa
ctcgcccaggtccacggcctgactgccaccggcgactacgacctcacccccacaggagac
acaccatga

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