KEGG   Roseomonas fluvialis: Rmf_43660
Entry
Rmf_43660         CDS       T08992                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
rfl  Roseomonas fluvialis
Pathway
rfl00061  Fatty acid biosynthesis
rfl00071  Fatty acid degradation
rfl01100  Metabolic pathways
rfl01212  Fatty acid metabolism
rfl02024  Quorum sensing
rfl04146  Peroxisome
Module
rfl_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:rfl00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    Rmf_43660
   00071 Fatty acid degradation
    Rmf_43660
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    Rmf_43660
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Rmf_43660
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rfl01004]
    Rmf_43660
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rfl04147]
    Rmf_43660
Enzymes [BR:rfl01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     Rmf_43660
Lipid biosynthesis proteins [BR:rfl01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   Rmf_43660
Exosome [BR:rfl04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   Rmf_43660
  Exosomal proteins of breast cancer cells
   Rmf_43660
SSDB
Motif
Pfam: AMP-binding AMP-binding_C AMP-binding_C_3
Other DBs
NCBI-ProteinID: BDG74437
UniProt: A0ABN6P6V6
LinkDB
Position
complement(4551123..4552730)
AA seq 535 aa
MDIARLCPLTTEEALLRAATLAPDVEAIVAPEGRATFAQLAAQVARVRGALVAAGVVRGD
HVGICLGNGPRWVALFLAIGSIGAVAVPVNTRFKADELAYALRQSRVRVLFLGARVLKVD
FLAMLRAICPGIDAVLPDPSLPDLVRVVVLDDAPPPRGTLGWDAFLAEGGTERPATCTPN
DTLLIQYTSGTTSFPKGVMLAHRSMCANGFVSGGRMGLRIGDRFHSARPFFHVAGTTLSI
LACLQHCATLVTMDRFEPGEALRMMEAERCTHVSGNDTMALMLLNHPDRAQRRLVLRGAW
AAASPAIVRRIIDELGARECVVGYGLSEAAPNVAQSCWWEPEDVRVSARMRRQPGIEVRI
RDLATGRDCAAGEAGEILVRGWSVMQGYFDKPVETAAALDAEGWLATGDIGRLGADGRLE
FAGRAKEIIRVGGENVAPAEVEDILHRHPAIRQAVVVGVPDPRLIEVPCAFVVLNDGAIA
TEAELLAWARDRMAGFKVPRHLRLVEGFESIGMTASAKVQRGPLARHAVQLLGLG
NT seq 1608 nt   +upstreamnt  +downstreamnt
atggatattgcacgtctctgcccgctcaccaccgaggaggcgctgctgcgcgccgcgacg
ctggcaccggatgtcgaggcgatcgtggcacccgagggtcgcgcgaccttcgcgcagctc
gccgctcaggtcgcgcgcgtccgcggcgcactcgttgccgccggcgtggtgcgcggcgat
cacgtcggcatctgcctcggcaacggcccgcgctgggtagcacttttcctcgccatcggg
tcgatcggcgcggtggcggtaccggtcaatacgcggttcaaggcggatgagctcgcctat
gcactgcggcagtcccgcgtgcgcgtgctgttcctgggggcgcgcgttctgaaggtggat
ttcctcgcgatgctgcgtgccatctgccctggcatcgacgcggtgttgccggatccctcg
ctgcccgacctcgtgcgcgtggtggtcttggacgatgcgccgccgccgcgcggcacgctt
ggctgggacgccttcctcgcggagggtgggacggagcggccggcgacgtgcacgcccaac
gacacgctgctgatccagtacacatcgggcaccacctccttccccaagggcgtcatgctg
gcgcatcgcagcatgtgcgcgaacgggttcgtctccggtggccggatgggactgcgcatc
ggcgatcgcttccacagtgcacggccgttcttccatgtggctggcaccacgttgtcgatc
ctggcatgcctgcagcattgcgccacgctggtcaccatggaccgcttcgaacctggcgag
gcgctgcgcatgatggaggccgagcgctgcacgcacgtctcgggcaacgacaccatggcg
ctgatgctgctgaaccatccggatcgcgcacagcggcgcctggtgctgcgcggcgcatgg
gccgcggcgtcgcctgcgatcgtgcggcgcatcatcgacgaactcggcgcgcgcgaatgc
gtggtgggctatggcctgtcggaagccgcgcctaatgtcgcgcagtcgtgctggtgggaa
ccggaagacgtgcgcgtctcggcgcgcatgcggcggcagcccggcatcgaggtccgtatc
cgcgatctggcgactgggcgcgactgtgccgcgggcgaggctggcgagatcctggtgcgc
ggatggagcgtcatgcagggctacttcgacaagcccgtcgagaccgccgccgcgctcgac
gccgaaggctggctcgccaccggagacatcggccgcctcggcgccgacggtcggctggaa
ttcgccggccgtgccaaggagatcattcgcgtcggcggcgagaacgtggcgccggcggag
gtggaggatatcctccatcgccacccggccatccgccaggcggtggtggtcggcgtgccc
gatcctcggctgatcgaggtgccctgcgcattcgtcgtgttgaacgacggcgcgatcgcg
accgaggccgagctgctggcctgggcgcgcgatcgtatggctggcttcaaagtgccgcgc
catctgcgcctggtcgaggggttcgagagcatcggcatgacggcgagtgcgaaggtgcag
cgcggcccgctcgctcggcatgcggtgcagctgctcgggctcggctga

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