KEGG   Roseomonas fluvialis: Rmf_44260
Entry
Rmf_44260         CDS       T08992                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rfl  Roseomonas fluvialis
Pathway
rfl00010  Glycolysis / Gluconeogenesis
rfl00020  Citrate cycle (TCA cycle)
rfl00260  Glycine, serine and threonine metabolism
rfl00280  Valine, leucine and isoleucine degradation
rfl00310  Lysine degradation
rfl00380  Tryptophan metabolism
rfl00620  Pyruvate metabolism
rfl00630  Glyoxylate and dicarboxylate metabolism
rfl00640  Propanoate metabolism
rfl00670  One carbon pool by folate
rfl00785  Lipoic acid metabolism
rfl01100  Metabolic pathways
rfl01110  Biosynthesis of secondary metabolites
rfl01120  Microbial metabolism in diverse environments
rfl01200  Carbon metabolism
rfl01210  2-Oxocarboxylic acid metabolism
rfl01240  Biosynthesis of cofactors
Module
rfl_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rfl_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rfl_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rfl_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rfl00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    Rmf_44260 (lpdA)
   00020 Citrate cycle (TCA cycle)
    Rmf_44260 (lpdA)
   00620 Pyruvate metabolism
    Rmf_44260 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    Rmf_44260 (lpdA)
   00640 Propanoate metabolism
    Rmf_44260 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Rmf_44260 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    Rmf_44260 (lpdA)
   00310 Lysine degradation
    Rmf_44260 (lpdA)
   00380 Tryptophan metabolism
    Rmf_44260 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    Rmf_44260 (lpdA)
   00670 One carbon pool by folate
    Rmf_44260 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rfl04147]
    Rmf_44260 (lpdA)
Enzymes [BR:rfl01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     Rmf_44260 (lpdA)
Exosome [BR:rfl04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   Rmf_44260 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 FAD_oxidored NAD_binding_8 GIDA HI0933_like AlaDh_PNT_C Thi4 FAD_binding_3 DAO 3HCDH_N Lycopene_cycl
Other DBs
NCBI-ProteinID: BDG74497
LinkDB
Position
complement(4617349..4618767)
AA seq 472 aa
MPETFDVIVIGAGPGGYVCAIRAAQLGMKVACVEKRETLGGTCLNIGCIPSKALLHSSEV
FEEAGKHFAEHGIGVGQVTLDLAKMQARKAEVVSANVKGVEFLFKKNKVTWLKGEGRIVA
PPGRANEGAPGTVQVAGTEYGAKHIVIATGSESTPLRGVEVDEKRIVTSTGALELDAVPG
HLVVIGGGVIGLEMGSVWRRLGAQVTVIEFLDGILPGMDGEVRKQFERILAKQGMKFRLS
SKVTGAAVDDTGVTLQVEPAAGGAAEAIRADVVLLAIGRRPHVTGLGLDAVGVVLDERGR
VKTDAHFTTNIPGIYAIGDAIAGAMLAHKAEDEGYALAEMLAGQKPHINYDAIPGVVYTW
PEVASVGATEETLKAAGVAYKVGKFPFMANGRARAMGATDGFVKVLADKVTDRVLGAHIV
GPDAGTLIAEIAMAIEFGASAEDIARVSHAHPSLNEAVKEAAMAAWNKALHI
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgcccgaaaccttcgacgtcatcgtgatcggcgccggccccggcggctatgtctgcgcc
atccgcgccgcgcagctcggcatgaaggtggcctgcgtcgagaagcgcgaaaccctgggc
ggcacctgcctcaacatcggctgcatcccgtccaaggcgctgctgcactcgtcggaggtg
ttcgaggaagccggcaagcatttcgccgagcacggcatcggcgtggggcaggtcacgctc
gacctggcgaagatgcaggcgcgcaaggcggaggtggtctcagccaacgtcaagggcgtc
gagttcctgttcaagaagaacaaggtgacctggctgaagggggaggggcggatcgtcgcg
ccccccgggcgcgcgaacgaaggcgcgcccggcaccgtgcaggtcgccggcaccgagtac
ggcgcgaagcacatcgtcatcgcaacggggtcggaatccacgcctctgcgcggtgtcgag
gtcgatgagaagcgtatcgtcacctccaccggcgcgctggagctggacgcggtgccgggc
catctggtggtgatcggcggcggcgtgatcgggctcgagatgggcagcgtctggcggcgc
ctcggcgcgcaggtgacggtgatcgaattcctcgatggcatcctgccggggatggatggc
gaggtgcgcaagcagttcgaacgcatcctggccaagcaggggatgaagttccgcctgtcg
tcgaaagtgaccggcgcggcggtggacgacaccggcgtgacgctacaggtggaacccgcc
gcgggcggcgcggcggaggcgatccgcgccgatgtcgtgctgctggcgatcggccgtcgg
ccgcatgtcacgggcctcgggctggacgccgtgggcgtggtgctggatgagcgcggccgc
gtgaagaccgacgcgcatttcacgaccaacatccccggcatctacgcgatcggggacgcg
attgccggcgcgatgctggcccacaaggccgaggacgagggctatgccctggccgagatg
ctggccggccagaagccgcacatcaactacgatgccatcccgggcgtggtgtatacgtgg
ccggaggtcgcctcggtcggtgccaccgaggaaacgctgaaggccgccggggtcgcctac
aaggtcggcaaattccccttcatggcgaatggccgcgcgcgtgcgatgggtgccaccgac
ggcttcgtgaaggtcctggccgacaaggtgaccgaccgcgtgctcggtgcgcacatcgtc
ggccccgatgccggcacgctgatcgcggaaatcgcgatggcgatcgagttcggcgcgagc
gccgaggacatcgcccgtgtcagccacgcgcatccgtccctgaacgaggcggtaaaggaa
gcggcgatggcggcctggaacaaggcgctgcacatctga

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