Roseomonas fluvialis: Rmf_46210
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Entry
Rmf_46210 CDS
T08992
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
rfl
Roseomonas fluvialis
Pathway
rfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rmf_46210 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfl03021
]
Rmf_46210 (rho)
03019 Messenger RNA biogenesis [BR:
rfl03019
]
Rmf_46210 (rho)
Transcription machinery [BR:
rfl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Rmf_46210 (rho)
Messenger RNA biogenesis [BR:
rfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Rmf_46210 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
AAA_25
OB_RNB
Spore_III_AA
AAA
S1CSD-TOTE-2
NACHT
ATPase_2
AAA_14
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
BDG74692
UniProt:
A0ABM7Y9I4
LinkDB
All DBs
Position
complement(4819399..4820673)
Genome browser
AA seq
424 aa
AA seq
DB search
MHLSELKAKSPADLLAFAEELNVENASTLRKQDMMFAILKTLAENDQAIFGEGTLEILPD
GFGYLRSPQANFLPGPDDIYISPAQVRRFALRTGDTVEGQIRAPKDGERYFAMLKVNNIN
FEPPEALKHRINFDNLTPLYPNRRLKMENPEVESVAKSPAKDNTHRVIDLIAPIGMGQRA
LIVAPPRTGKTVMLQNIAKSISANNPEVFLMVLLIDERPEEVTDMARTVRGEVVASTFDE
PATRHVQVTEMVLEKAKRLVEHKRDVVILLDSITRLGRAYNSVVPSSGKVLTGGVDANAL
QRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIILDRKLSDKRV
FPAIDITKSGTRKEELLVDRGTLSKMWVLRRILNPMGTQDAMEFLTDKLKYSKTNQDFFD
AMNT
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcacctctccgaactcaaggccaaaagccccgccgacctcctcgccttcgccgaggag
ctgaacgtcgagaacgcatccaccctgcgcaagcaggacatgatgttcgccatcctcaag
accctggcggagaacgaccaggcgatcttcggcgagggcaccctcgagatcctgcccgac
ggcttcggctacctgcgctcgccgcaggcgaacttcctgccgggacccgacgacatctac
atctcgcccgcgcaggtccggcgcttcgcgctgcgcaccggcgatacggtcgaagggcag
atccgcgcgccgaaggatggcgagcgctacttcgcgatgctgaaggtcaacaacatcaat
ttcgagccgcccgaggcgctcaagcatcgcatcaacttcgacaacctgacgccgctctat
ccgaaccgccggctcaagatggagaacccggaggtcgagagcgtcgcgaagtcccccgcc
aaggacaacacgcaccgcgtcatcgacctgatcgcccccatcggcatgggccagcgcgcg
ctgatcgtcgcacccccgcgcaccggcaagaccgtgatgctgcagaacatcgcgaagagc
atcagcgcgaacaatcccgaagtcttcctgatggtgctgctgatcgacgagcggcccgag
gaagtcaccgacatggcgcgcaccgtgcgcggcgaggtcgtggcctccaccttcgacgag
ccggccacgcgccatgtgcaggtcaccgagatggtgctcgagaaggccaagcgtctggtc
gagcacaagcgcgacgtggtgatcctgctggattcgatcacgcgcctgggccgcgcctac
aactccgtggtgccgtcgtcgggcaaggtgctgaccggtggtgtcgacgccaacgccctg
cagcgccccaagcgcttcttcggcgcggcgcgcaacatcgaggaaggcggctcactgacc
atcatcgccaccgcgctgatcgacaccggttcacgcatggacgaggtgatcttcgaggaa
ttcaagggcaccggtaacagcgaaatcatcctggaccgcaagctgtccgacaagcgcgtg
ttcccggccatcgacatcaccaagtccggcacccgcaaggaggagctgctggtcgatcgc
ggcacgctgtccaagatgtgggtgctgcggcgcatcctgaacccgatgggcacgcaggac
gcgatggagttcctcaccgacaagctgaagtacagcaagacgaaccaggacttctttgat
gcgatgaacacctga
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