Roseomonas fluvialis: Rmf_48090
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Entry
Rmf_48090 CDS
T08992
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rfl
Roseomonas fluvialis
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rfl03016
]
Rmf_48090 (truB)
Enzymes [BR:
rfl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Rmf_48090 (truB)
Transfer RNA biogenesis [BR:
rfl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Rmf_48090 (truB)
Prokaryotic type
Rmf_48090 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
BDG74880
LinkDB
All DBs
Position
5004627..5005655
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AA seq
342 aa
AA seq
DB search
MAHHRHRKPKGRPLDGWLIIDKPTAIGSTDVVAICKRAFQAQKCGHGGTLDPLATGVLPI
AFGAATKTVPYVMDGTKQYRFTLKLGEARDSDDADGNVIGTSDARPTDDQLRAALPAFIG
DILQVPPIYSAIKIAGERAYDLARAGEAVELAPRPARVDRFELIDRPDGDTAVFFVESGK
GVYMRSLARDVAKACGTLGHIAALRRMRVGPFHEKDAVALDRIAVSGDTPPPSPDLLLPV
TTALADIPALALTEAEAARLSFGQPIPLVELMGRVPREANPDGGLARAMAGGRLMGLARF
DEGLLKPERWLDQGGSEAQRRPRGAAPADIIAEGDNPGQHEG
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcccatcatcgtcaccgcaagcctaaaggccgtccgctcgatggctggctgatcatc
gacaagccgaccgcgatcggcagcaccgatgtcgtcgcgatctgcaagcgcgcgttccag
gcgcagaaatgcggccatggcggtacgctggatccgctggccaccggcgtgctgccgatc
gctttcggcgccgccaccaagaccgtgccctatgtcatggacgggacgaagcagtaccgc
ttcacgctgaagctgggcgaggcccgggattccgacgatgccgacggcaatgtcatcgga
accagcgatgcgcggccgaccgacgaccagctgcgcgccgccctgcccgccttcatcggc
gacatcctacaggtcccgccgatctattccgccatcaagatcgcaggcgaacgcgcctac
gacctggcccgcgcaggtgaagccgtggaactggccccgcggccggcgcgcgtcgaccgc
ttcgaactgatcgaccgcccggacggcgacaccgcggtattcttcgtggaatccggcaag
ggcgtgtacatgcgctcgctcgcgcgcgacgtcgcgaaggcctgcggcacgctggggcat
atcgccgccctgcgccggatgcgcgtgggccccttccacgagaaggacgccgtcgccctg
gacaggatcgccgtttccggcgataccccgcccccttccccggaccttctgcttccggtg
acgaccgcgctggccgacatcccggcgctggccctcactgaagccgaagccgcccgactg
tccttcggccagcccataccgctggtcgaattgatgggccgggttccgcgcgaggccaac
cccgatgggggcctggccagagcgatggcgggggggcgcctgatgggtctcgcccgcttc
gacgaaggcttgctgaagccggagcggtggctggaccagggcggttccgaggcccaacgg
cgcccccgcggcgccgcgccggccgacatcatcgccgaaggggacaaccccggccaacac
gaaggataa
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