Roseomonas fluvialis: Rmf_48890
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Entry
Rmf_48890 CDS
T08992
Name
(GenBank) farnesyl-diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl00900
Terpenoid backbone biosynthesis
rfl01100
Metabolic pathways
rfl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Rmf_48890
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rfl01006
]
Rmf_48890
Enzymes [BR:
rfl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Rmf_48890
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Rmf_48890
Prenyltransferases [BR:
rfl01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Rmf_48890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BDG74960
LinkDB
All DBs
Position
5086525..5087439
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AA seq
304 aa
AA seq
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MESITASSEGLRAAMTQAAADIDEALDILIPRPEGPEAKLFEAMRYAAIGGGKRLRGFLV
LEGARQFGVARDPALRTAAAIEMLHAYSLVHDDLPCMDDDDLRRGKPTLHKAFDEATAVL
AGDALQANAFYVLAEPDTHSDSYVRAELCRCLARASGPRGMCGGQMLDMLAEEAGEPLEE
AEIGRLQLLKTGKLIEFAAEAGAILGKAPLQMRHAFAAYGRDLGAAFQIADDLLDATVSA
EEAGKRTGKDAEAGKATLVGLLGIPRARAHAERLAAQAAAHLDALGERADLLRALADYAI
ARRT
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggaatccatcacggcctcctccgagggcctgcgcgccgccatgacccaggcagcggcg
gatatcgacgaggcgctcgacatcctgatcccgcgccccgaaggccccgaggccaagctg
ttcgaagccatgcgctatgccgcgatcggcggcggcaagcgcctgcgcggcttcctggtg
ctggaaggtgcgcggcagttcggcgtcgcgcgcgaccccgccctgcgcaccgccgccgcc
atcgagatgctgcacgcctattccctggtgcatgacgacctgccctgcatggacgatgac
gacctgcgccgcggcaagcccacgctgcacaaggctttcgacgaagcgaccgcggtgctg
gccggcgatgcgctgcaggccaacgccttctacgtgttggccgaacccgacacgcattcc
gacagctacgtgcgcgccgagctgtgccgctgcctcgcgcgcgcctccggcccgcgcggc
atgtgcggcgggcagatgctggatatgctggccgaggaagcgggcgaaccgctcgaggaa
gccgagatcggccggctgcagctgctcaagaccggcaagctgatcgaattcgccgccgag
gccggggccatcctgggcaaggcaccgctgcagatgcgccatgccttcgccgcctatggg
cgcgacctgggcgccgccttccagattgccgacgacctgctggatgcgaccgtcagcgcc
gaggaggctggcaagcgtaccggcaaggatgccgaggccggcaaggccacgcttgtgggc
ctgcttggcatcccgcgcgcacgtgcgcatgcggaacgactggccgcgcaggcggccgca
catctggacgctttgggtgaacgtgccgatctgttgcgggcgctcgccgactacgcgatc
gcgcggaggacctga
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