Roseomonas fluvialis: Rmf_50640
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Entry
Rmf_50640 CDS
T08992
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl03030
DNA replication
rfl03430
Mismatch repair
rfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rmf_50640 (holA)
03430 Mismatch repair
Rmf_50640 (holA)
03440 Homologous recombination
Rmf_50640 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfl03032
]
Rmf_50640 (holA)
03400 DNA repair and recombination proteins [BR:
rfl03400
]
Rmf_50640 (holA)
Enzymes [BR:
rfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rmf_50640 (holA)
DNA replication proteins [BR:
rfl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rmf_50640 (holA)
DNA repair and recombination proteins [BR:
rfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rmf_50640 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
BDG75135
LinkDB
All DBs
Position
complement(5269469..5270494)
Genome browser
AA seq
341 aa
AA seq
DB search
MAKLDARRISGFLADPGAARIVLVFGEDGGLVRERADALVRAVAGDDPFRLVDVPREVAA
KDAGLLAAEAATPALTGGRRLVRVRDATDGLANGAKVVLAGNGPGLVLLEGGSLDGRKGL
RAALEKAGPEAAVIACYAETGAALEGSINALLKGFGVTAESSAVSWMAQRLGEDRLVMRR
ECEKLALYVGAGGRVTEEDAVASLSEGSTLDLDAALLAATEGDPARADRALDAAFAEGAH
AVQVVRGALRHVQRLEVAAMAVARGAAPKDAVDGLRPPVFFKSRPSFERALRLWRPEMLA
AAGAALLEAERATKTTGMPDTAVARAAVMGLAREAVRARRG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagctcgacgcgcgccgcatctcgggcttcctggccgaccccggcgccgcgcgc
atcgtgctggtgttcggcgaggatggcggcctggtgcgcgaacgcgctgacgccctggtg
cgcgcggtggcgggcgatgatcccttccggctggtcgatgtgccgcgcgaggtcgcggcg
aaggatgccgggttgctcgccgccgaggccgcgacgccggcgctgacgggcgggcgccgc
ctcgtgcgtgtgcgcgatgcgacggacgggctggcgaatggcgcgaaggtcgtgctcgcc
ggcaacgggccgggcctggtgctgctggaaggcggctcgctcgatggccgcaaggggctg
cgcgcggcgctggagaaggcgggaccggaagcggcggtgatcgcctgttacgccgagacg
ggcgcggcgctggaagggtccatcaacgcgttgctcaagggcttcggagtaactgccgaa
tcctccgcagtgtcctggatggcgcagcgcctgggcgaggaccgcctggtgatgcggcgc
gaatgcgagaagctggcgctgtacgttggcgccggcgggcgtgtgaccgaggaggacgcg
gtcgcatcgctgtccgagggttcgacgctcgacctcgacgccgcgctgctggcggcgacc
gagggcgaccccgcgcgcgccgaccgcgcgctcgacgccgctttcgccgagggcgcgcac
gcggtgcaggtggtgcgcggcgccctgcggcacgtgcagcggttggaagtggctgcgatg
gcggtggcgcgcggcgctgcaccgaaggatgcggtcgatgggctgcgcccgccggttttc
ttcaagtcccgcccatccttcgaacgcgcgctgcggctgtggcggcccgagatgctggcg
gcggccggcgcggcgctgctggaggctgaacgcgcgaccaagaccacggggatgccggat
acggcggtggcgcgggcagcggtgatggggttggcgcgggaggcggtcagggcgcggcgg
gggtag
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