Roseomonas fluvialis: Rmf_50740
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Entry
Rmf_50740 CDS
T08992
Symbol
trpS
Name
(GenBank) tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Rmf_50740 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rfl01007
]
Rmf_50740 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rfl03016
]
Rmf_50740 (trpS)
Enzymes [BR:
rfl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
Rmf_50740 (trpS)
Amino acid related enzymes [BR:
rfl01007
]
Aminoacyl-tRNA synthetase
Class I (G)
Rmf_50740 (trpS)
Transfer RNA biogenesis [BR:
rfl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Rmf_50740 (trpS)
Prokaryotic type
Rmf_50740 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
BDG75145
UniProt:
A0ABN6PAI4
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All DBs
Position
5281625..5282626
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AA seq
333 aa
AA seq
DB search
MTRVFSGIQPSGVPTLGNYLGAIRNWVPLQDQAEAIYCVVDLHAITVWQDPAELTRQTRE
MAAALIACGLDPQRCILFVQSHVRAHAELAWIFNCVARLGWLNRMTQFKDKAGKNQEASS
AGLYVYPNLMAADILTYHATKVPVGDDQKQHLELANDIAQKFNHDYGVEFFPTIEPLIQG
VAARVMSLRDGTKKMSKSDPSDQSRINLTDDADTIAMKIRRAKTDPEPLPDHMAGLENRP
EARNLVGILAAITNTLPENVLREHGGQGFGAFKSTLADALVAHLQPIAGEMKRLLDDPGA
LDSALHVGAERARAIAEPIAARAREIVGFLPAR
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcgtcttctccggcatccagccctcgggcgtgcccaccctcggcaactacctc
ggcgccatccgtaactgggtgccgctgcaggaccaggccgaggcgatctattgcgtggtg
gacctgcacgcgatcaccgtctggcaggaccccgcggaactgacacgccagacgcgcgag
atggcggcggcgctgattgcctgcgggctggatccgcagcgctgcatcttgttcgtgcag
tcccatgtgcgcgcgcatgcggagctggcctggatcttcaactgcgtcgcgcggctgggc
tggctgaaccgcatgacgcagttcaaggacaaggccggcaagaaccaggaggcatccagc
gcgggcctgtacgtctatccgaacctgatggcggccgacatcctgacctatcacgcgacc
aaggtgccggtcggcgacgaccagaagcagcacctggaactggccaacgatatcgcgcag
aagttcaaccacgactacggcgtggagttcttcccgaccatcgagccactgatccagggc
gtggcggcacgcgtgatgtcgctgcgggacgggacgaagaagatgtcgaagtccgacccg
tcggaccagtcgcgcatcaacctgaccgacgatgccgacaccatcgccatgaagatccgt
cgcgcgaagacggaccctgagccgctgcccgaccacatggcgggcctcgagaaccggccg
gaggcgcgcaacctggtcggcatcctggccgccatcacgaacacgctgcccgagaacgtg
ctgcgcgaacatggcgggcagggcttcggtgccttcaagtcgacgctggcggatgcgctg
gtggcccacctgcagccgatcgcgggcgagatgaagcggctgctggacgaccccggcgcg
ctggattcggcgctgcatgtgggggcggagcgtgcgcgcgcgatcgccgagccgatcgcg
gcgcgggcgcgcgagatcgtggggttcctgccggcgcggtag
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