Roseomonas fluvialis: Rmf_51470
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Entry
Rmf_51470 CDS
T08992
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl03030
DNA replication
rfl03430
Mismatch repair
rfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rmf_51470
03430 Mismatch repair
Rmf_51470
03440 Homologous recombination
Rmf_51470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfl03032
]
Rmf_51470
03400 DNA repair and recombination proteins [BR:
rfl03400
]
Rmf_51470
Enzymes [BR:
rfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rmf_51470
DNA replication proteins [BR:
rfl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Rmf_51470
DNA repair and recombination proteins [BR:
rfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Rmf_51470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
RuvB_N
AAA_19
AAA_5
AAA_30
AAA_14
AAA_18
ResIII
DUF815
nSTAND3
AAA_assoc_2
TsaE
DNA_pol3_delta_C
Viral_helicase1
NTPase_1
Mg_chelatase
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
BDG75218
LinkDB
All DBs
Position
complement(5352370..5354364)
Genome browser
AA seq
664 aa
AA seq
DB search
MPGSLAGLPPFFAPRSRDSMASDLLGSPISDLGGAAAEEGLPEPPAPEGPGLFGEPAPAP
AAPAAPAASPPPKPAAAPTGPYRVLARKYRPTHFDDLIGQDALVRTLRNAFAQGRVHHAF
LLTGVRGVGKTTTARIIARALNCIGVDGKGGPTADPCGVCAECRAILADRHPDVTEMDAA
SNNGVDDVRELREALRFRPAQGRQKVFILDECHMLSAAAFNALLKTLEEPPPSVTFVLAT
TELRKVPVTIRSRCQVFSLRRVPQEMLRDHFAGIAAKEDVAVEAEALGMIARAADGSVRD
GLSLLDQAIGLAGGGAVTGEGTRDMLGLADRFMVFDLMEAVMGGDVAAALSILDRTHEVG
ADPLAVLQDLAELTHLLTRFRAAPALKDDASLPEAERTRGAALAMRLSVPTLARAWQMLL
KGVAEVQQEGVDRRAAAEMVLIRLAHVADLPSPGDLVKRLTSEGGGDAAPRPAPGGGSGG
MRAIAGGGAVASAAPEPVAAALPQPREWREVVALASGVKPLLHAHLLHDVHPVRIAPGRV
EIRPLPSAPRDLAAQLTALLAERTGTRWTVAVSNEPGEPTLAEQGRSAETDRRAIAQSHP
LVQAILAAFPGATIETVRDEAADDYGLVATPAAIGAEPDDDGRGFAPPEADSAWTDDDDI
PNDD
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
ttgcccgggtcgcttgccggccttccacccttcttcgccccccgatccagggacagcatg
gcctccgacctcctcggctcccccatttccgacctgggcggcgccgcagcggaagaaggc
ctgccggaaccgcccgcgcccgaggggccggggctgttcggcgagcctgcgcccgcgccc
gccgcgcccgccgcgcccgccgcgtccccgccgcccaagcccgccgccgcgccgaccggc
ccctatcgcgtgctggcacgcaagtaccgcccaacccatttcgacgacctgatcggtcag
gacgcgctggtgcgcacgctgcgcaacgccttcgcgcaggggcgcgtgcatcacgccttt
ttgctgaccggcgtgcgcggcgtgggcaagaccaccacggcgcgcatcatcgcccgcgcg
ctgaattgcatcggtgtggacgggaaaggcggcccgacggccgatccctgcggcgtctgt
gccgaatgccgcgccatcctggccgaccgccaccccgacgtgaccgagatggacgccgcg
tccaacaacggcgtggacgacgtgcgggaactgcgcgaggcgctgcgattccgtcccgcc
cagggccgccagaaggtcttcatcctggacgagtgccacatgctctcggccgcggccttc
aacgcgctgctgaagacgctcgaggaaccgccgccctccgtcacgtttgtcctggccacc
acggaactgcgcaaggtgcccgtcaccatccgcagccgctgccaggtgttctcgctgcgc
cgcgtgccgcaggagatgctgcgcgaccatttcgccggcatcgccgccaaggaggatgtg
gcggtcgaggccgaggcgctcggcatgatcgcccgcgccgccgacgggtcggtgcgcgat
ggcctttcactgctggaccaggcgattggtttggcaggcggcggcgccgtgaccggcgaa
ggtacgcgcgacatgctcggcctggccgaccgcttcatggtcttcgacctgatggaggcg
gtgatgggcggcgatgtcgccgccgcgctgtccatcctggaccgcacgcatgaagtgggc
gccgacccgctggccgtgctgcaggacctggcggaactgacgcatctgctgacccgcttc
cgcgccgcccccgcgctgaaggacgatgcctccctgcccgaggccgagcgcacgcgcggc
gccgcgctggccatgcgcctgtcggtgccgacgctggcgcgcgcctggcagatgctgctc
aagggcgtggccgaggtgcagcaggaaggcgtggaccgccgcgcggccgccgaaatggtg
ctgatccgcctggcgcatgtggcggacctgccttcgccgggcgatctggtgaagcgcctg
acatccgaaggcggtggcgatgcagccccgcgccccgcgccgggcggcggttcgggtggg
atgcgggcgatcgccggcggtggcgccgtggcctccgccgcgccggaaccggtggcggcc
gctctgccgcagccgcgcgaatggcgcgaggtggtggcactcgcctccggcgtgaagccg
ctgctgcacgcgcatctactgcacgacgtgcatccggtccgtattgcgcccgggcgcgtc
gagatccgccccctgccctccgccccgcgcgacctggccgcgcagctcacggcgctgctg
gccgagcgcaccggcacgcggtggaccgtggcggtcagcaacgaaccgggcgaaccgacg
ctggccgaacagggccgcagcgccgagacagaccgccgcgccatcgcccagagccacccg
ctggtgcaggccatcctcgccgccttccccggtgcgaccatcgagaccgtgcgcgacgaa
gccgccgatgactacggcctggtcgccacccccgcggcgattggcgccgaacctgacgac
gacggccgcggtttcgcgccgccggaagcggattccgcctggaccgacgacgacgacatc
cccaacgacgattga
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