Roseomonas fluvialis: Rmf_52000
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Entry
Rmf_52000 CDS
T08992
Symbol
kdtA
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
rfl
Roseomonas fluvialis
Pathway
rfl00540
Lipopolysaccharide biosynthesis
rfl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rfl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Rmf_52000 (kdtA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rfl01005
]
Rmf_52000 (kdtA)
Enzymes [BR:
rfl01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
Rmf_52000 (kdtA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
Rmf_52000 (kdtA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
Rmf_52000 (kdtA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
Rmf_52000 (kdtA)
Lipopolysaccharide biosynthesis proteins [BR:
rfl01005
]
Lipid A
Rmf_52000 (kdtA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Motif
Other DBs
NCBI-ProteinID:
BDG75271
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Position
5415075..5416469
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AA seq
464 aa
AA seq
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MSGTWRGAWAAALWWGAAAAVAPALRVHLWRRARRGKEVTARLPERYGHGAARPPGRLVW
LHAASVGETMSVLPLIGALAARDPALHVLVTTGTVTSATLFAERLPPALAARVAHRFVPL
DVPRWVARFLDAWRPDTAVFVESELWPNLIAATHARRIPMALVNARMSVRAARRWARAPG
LARQVLSAFTLVLAQSEGDAARLRALGATGATSPGNLKFAAAPLPAEPADLARLAALVGD
RPAWVAASTHPGEEALVIAAHRRLVADHPDLLTIIVPRHPDRGAEVAALGGGIDLARRSL
GQDPDAGTQVLVADTLGELGLWYRLARLAFVGGSLVAHGGQNPLEPARLGCPVLVGPHTW
NFTDILDGMAAAGGLFRIDAGPDPAAALAEAVAGMLTNPEGRGAQARAAAAFAANQAELP
VRIAEALSPLLPGPGDVTAAPGGQRAASPETSGASGERTRVNGT
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
ttgtctggaacctggcgtggggcctgggcggccgcgctgtggtggggcgcggcggcggcg
gtggcgccggcgttgcgggtgcacctatggaggcgcgcacgtcgcggcaaggaagtcacg
gcacgtctgccggaacgctacgggcacggcgcggcgcgcccgccgggacgcctggtgtgg
ctgcacgcggcgagcgtgggcgagaccatgtcggtcctgccgttgatcggggcgctggcg
gcgcgcgacccggcgctgcatgtcctggtcaccacaggcaccgtcacctcggccacgctg
ttcgcggagcgcctgccgccggcactggccgcgcgcgtggcgcatcgcttcgtgccgctg
gacgtgccgcgctgggtggcccgcttccttgacgcttggcggccggatacggcggtcttc
gtggaatcggagctctggccgaacctgatcgccgctacccatgcccgccgcataccgatg
gcgctggtcaatgcgcgcatgtcggttcgcgcggcccggcgctgggcccgcgcgccgggg
ctggcgcggcaggtgctctcggccttcacgctggtgctggcgcaatccgagggcgacgcg
gcccgcctccgcgccctgggcgccaccggcgcgaccagccccggcaacctgaaattcgcc
gctgcccccctgccggccgaaccggccgacctcgcgcgcctggcggcgctggtcggcgac
cggccggcctgggtcgccgccagcacgcatccgggcgaggaagcgttggtcatcgccgcg
catcgccgcctggtggccgaccatcccgacctgctgaccatcatcgtgccacgacatccc
gaccggggggccgaagtcgcggccctgggcggcgggatcgatctggcgcggcgcagcctg
gggcaggacccggatgcgggcacgcaggtgctggtggccgatacgctgggtgagctcggc
ctgtggtaccgcctggcgcggctcgccttcgtcggcgggtcgctggtggcgcatggcggg
cagaatccgctggaaccggcgcgcctcggctgcccggtgctggtcgggccccacacctgg
aacttcaccgacatcctggacggcatggcggcagccggcgggctgtttcgtatcgacgcc
ggaccggacccggcggccgcgctggccgaggccgtggctggcatgctaaccaaccctgaa
gggcggggcgcacaggcacgcgcagccgccgcgtttgcggccaaccaggccgagctgccg
gtccggatcgcggaggcgctgtcgccgctgctgcccggcccgggcgacgtcacggccgca
ccgggcggccagcgcgcggcgtcaccggaaacatccggggcgtcgggggaaaggacaagg
gtgaacggtacctga
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