Reinekea forsetii: REIFOR_00236
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Entry
REIFOR_00236 CDS
T05208
Symbol
uvrD
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rfo
Reinekea forsetii
Pathway
rfo03420
Nucleotide excision repair
rfo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rfo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
REIFOR_00236 (uvrD)
03430 Mismatch repair
REIFOR_00236 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfo03400
]
REIFOR_00236 (uvrD)
Enzymes [BR:
rfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
REIFOR_00236 (uvrD)
DNA repair and recombination proteins [BR:
rfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
REIFOR_00236 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
REIFOR_00236 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_22
Viral_helicase1
Catalase-rel
Clostridium_P47
Motif
Other DBs
NCBI-ProteinID:
ATX75413
UniProt:
A0A2K8KK88
LinkDB
All DBs
Position
232765..234999
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AA seq
744 aa
AA seq
DB search
MPKADEIVQTICYTSPVFIYSSPIMTSLQLDLLNPQQHAAVTSESQHLLVLAGAGSGKTR
VLTHRIGWLVAAGLASPFSVLAVTFTNKAAKEMKSRIEALLETPAHSLWVGTFHGLAHRL
LKAHWQQAKLPQNFQVMDSDDQLRLVKRIISELNISDERIVPKQVQWFINGQKDEGRRAA
YVMSHGDWYEDTLKEIYTRYEAICQLSGLVDFGELLLRAHELWLNQPSVLEHYQTRFSHI
LVDEFQDINEIQYAWLRVLAGDRLSLTIVGDDDQSIYGWRGAKVENIQTFDVDFEGAEVV
RLEQNYRSTATILEAANTVIGNNQGRLGKDLWTDGDKGEPIRLYAGFNEQDEARYIADEM
NRLIEAGTNPTDIALLYRSNAQSRVLEEALIHLQVPYRIYGGVRFYERLEIRNSVAYLRL
ILNQQDDASMERIMNVPPRGIGNKTLETLRILAREQGCSLWQAAQMALDNKVLATRAANA
LVDFIKLIVDLTETVLEQDDLGAMVKLVNDASGMIEYHEKEKGEKGRTRVENLNELISAA
QSYTTEIDFSAPAERLAQFISEASLDAGDNQADEFEDSVNLMTLHSAKGLEFDYVFLAGL
EENLFPHKMSLSDAGGIQEERRLAYVGITRARTLLTLTYAESRRLYGNETFNTLSRFVRE
IPDTLLHEVRLRSTVSRPVNFGLQQDMAIGDAGLSIGQRVNHPMFGEGIIVNAEGGGAQT
RVLVAFDDGKERMLMLQYANLQAV
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaggcagatgagattgttcagaccatctgctacacttcgcctgtttttatatac
agtagcccaattatgacctccttgcagctcgacttgctcaacccacaacaacacgccgcc
gtgaccagcgagagccaacatctattggtgctggccggagcgggttccggtaaaacgcgg
gtattgactcaccgtatcggttggttggttgcggcgggtctggcgtcgccctttagtgtt
ctggcggtgacctttaccaataaggccgccaaagagatgaagagccggatcgaggccctc
ttagagactccggcccacagcctatgggtcggcacctttcacggcctggcgcatcggctg
ttaaaggcgcactggcaacaggctaagttgccgcaaaactttcaggtgatggacagcgac
gatcagctgcggctggtcaaacgtattatcagcgaattgaacatcagtgatgaacggatt
gtgcccaagcaggtgcagtggtttatcaatggccaaaaagatgaggggcgccgcgccgct
tatgtgatgtcgcacggcgactggtatgaagacaccctaaaagaaatttacacccgctat
gaggcgatctgccagctcagcggtttggtcgattttggtgagttgctgctgcgtgcgcat
gagttatggctcaatcagccctcggtcttggagcactaccagactcgcttcagccatatt
ctggtcgacgagtttcaggatatcaacgagatccaatacgcttggttgcgggtcttggcc
ggcgatcgattgagcctaaccattgtcggtgacgatgaccaatcgatctacggctggcgc
ggcgccaaggtagaaaatattcagaccttcgatgtcgactttgagggcgccgaagtcgtg
cgcctagagcagaactatcgttcgacggcgaccattctcgaggccgccaacacggtaatc
ggcaacaaccaggggcgcctgggcaaggatctatggaccgatggcgataagggtgaaccg
atccgactctatgccggctttaatgagcaggacgaagcgcgctatatagccgatgaaatg
aatcggttgattgaagcgggaaccaacccaaccgatattgccctactgtatcgctcgaac
gctcaatcgcgcgtgctcgaagaagccctgattcacctccaagtgccctatcgtatctat
ggcggagtgcgtttctatgagcggctggaaatccgcaattcggttgcctatttgcggctg
attctgaaccagcaagacgatgcctcgatggaacggattatgaacgtgccgccgcgcggg
atcggcaataagacgctggaaaccctgcgcatcttggcgcgtgagcaaggctgttcactc
tggcaggcggcgcaaatggccttggacaacaaggtcctagcgacccgagcggccaatgcc
ctagtcgactttattaagctgatcgttgacttgaccgagaccgtgctggaacaggatgat
ctgggcgcgatggtcaagctggtcaacgatgcctccgggatgatcgaataccatgaaaaa
gaaaagggtgaaaaaggccgtacccgggttgagaaccttaacgaactgatcagtgccgcc
cagagttacactaccgaaatcgatttttcagcgccggcggaacgactggcgcagtttatc
agcgaagcgtcgctcgatgccggcgacaaccaggccgatgagtttgaggacagcgtgaat
ctgatgaccctgcacagcgccaagggtttggaatttgactatgtgtttctcgccgggttg
gaagaaaacctgtttccgcacaagatgtcgctgtccgatgccgggggcattcaggaggaa
cgtcgcctggcctatgtcggcatcacccgtgcacgcaccctgctcactctgacctatgcc
gagagtcggcgtctctatggtaatgaaacctttaacaccttgtcgcgttttgttcgggag
atacccgacactttgctgcacgaggtgcgcctgcgttccaccgtgtcgcggccggtcaac
tttggcctgcagcaggacatggcgatcggcgacgccggtctgtcgatcgggcaacgggtc
aatcacccgatgtttggcgagggcattatcgtcaatgccgagggcggtggcgcccagacc
cgcgtattggtcgcctttgacgatggcaaggagcgcatgctgatgctccagtatgccaac
ttgcaagcggtttaa
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