Reinekea forsetii: REIFOR_00358
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Entry
REIFOR_00358 CDS
T05208
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rfo
Reinekea forsetii
Pathway
rfo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rfo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
REIFOR_00358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rfo03021
]
REIFOR_00358
03400 DNA repair and recombination proteins [BR:
rfo03400
]
REIFOR_00358
Enzymes [BR:
rfo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
REIFOR_00358
Transcription machinery [BR:
rfo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
REIFOR_00358
DNA repair and recombination proteins [BR:
rfo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
REIFOR_00358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
ATX75535
UniProt:
A0A2K8KKQ2
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All DBs
Position
369297..370298
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AA seq
333 aa
AA seq
DB search
MQRSVNDFLTPRHIDVQEVSANRAKITLEPLERGFGHTLGSALRRILLSSMPGAAITEVE
IDGVLHEYSTIEGVQEDVQEILLNLKDVAVKLFDRDECTLTLKKVGAGTLTAGDIQLDHG
VEIANPEHIIAHMGTAGNVSMTLKVTVGRGYVPAESRSSEEGESKPIGRLQLDATYSPVV
RVAYSVENARVEQRTDLDKLIIELETNGTLDPEEAIRRSATILQQQVAAFVDLDHQAEAV
QEKEEDKIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASKGLSLGMVLESWPPASLKNDDKVLA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagttaacgactttttgacgccacgtcacatcgatgtgcaagaagtaagt
gcgaaccgtgccaaaatcacgctcgaacctctcgaacgtggctttggtcacactttaggc
agcgcactgcgtcgtattctgctgtcgtctatgccaggcgcggcgatcaccgaagttgaa
atcgacggtgttctacacgaatacagtaccatcgaaggcgttcaggaagatgttcaggaa
atcctgctcaacctgaaagacgttgctgttaagttattcgatcgtgatgagtgcactctg
actttgaaaaaagttggtgccggtactttaacagctggtgatatccagctggatcacggt
gttgaaatagctaacccagagcatattattgcgcacatgggcaccgccggaaacgtcagt
atgacgttgaaggtgactgtcggtcgcggttatgttccggctgaatcccgaagcagcgaa
gaaggcgagagtaaaccaattggtcgcttgcagttggatgctacttatagcccggtcgtg
cgggttgcttacagcgttgaaaacgcgcgggttgagcagcgtacagacttagataaattg
attattgaactggaaaccaacggtacattggatcctgaagaagccatccgccgctctgcc
actatcttgcaacagcaagtagcagcattcgtcgacttggatcatcaggctgaagctgta
caagagaaagaagaagataagattgatcctattcttcttcgtccggtcgatgatcttgaa
ctcacggtacgtagtgcgaactgcctcaaagcagagaacatatactacattggggatcta
attcagcgcaccgaggttgaactgctaaaaacccctaacctggggaagaagtctttaact
gaaattaaagacgttttggcatccaagggtctgtcactgggtatggtcctagagtcatgg
ccgcctgcaagtttaaagaacgacgacaaggtgcttgcgtga
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