Reinekea forsetii: REIFOR_00396
Help
Entry
REIFOR_00396 CDS
T05208
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rfo
Reinekea forsetii
Pathway
rfo00260
Glycine, serine and threonine metabolism
rfo00460
Cyanoamino acid metabolism
rfo00630
Glyoxylate and dicarboxylate metabolism
rfo00670
One carbon pool by folate
rfo00680
Methane metabolism
rfo01100
Metabolic pathways
rfo01110
Biosynthesis of secondary metabolites
rfo01120
Microbial metabolism in diverse environments
rfo01200
Carbon metabolism
rfo01230
Biosynthesis of amino acids
rfo01240
Biosynthesis of cofactors
rfo04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rfo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
REIFOR_00396
09102 Energy metabolism
00680 Methane metabolism
REIFOR_00396
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
REIFOR_00396
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
REIFOR_00396
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
REIFOR_00396
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
REIFOR_00396
Enzymes [BR:
rfo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
REIFOR_00396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
Aminotran_1_2
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ATX75571
UniProt:
A0A2K8KNV9
LinkDB
All DBs
Position
409286..410548
Genome browser
AA seq
420 aa
AA seq
DB search
MFEKTMNIADYDADLWQAMEAERVRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEHVDVVEQLAIDRAKELFGAEFANVQPHSGSQANGAVYMALCKPGDTILGMS
LAHGGHLTHGASVSFSGRIYNAVQYGLNTDTGEIDYDQVDALAREHKPKMIVAGFSAYSL
IVDWARFRAIADEVGAFLFVDMAHIAGLVAAGVYPSPMPFADVVTTTTHKTLGGPRGGLI
LAHNDEALNKKLNFAVFPESQGGPLMHVIAGKAVCFKEAMEPEFKLYQAQVVKNAKAMAA
AFMARGIRIVSNGTEDHLFLVDLIGKSYSGKDADAALGLANITVNKNSVPNDPRSPFVTS
GLRIGTPSITRRGFNEAEATQLTNWICDVLDALETGNADAMIAEVKAKVIAICASLPVYR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaaaaccatgaatattgccgattacgatgccgacctgtggcaggcaatggaa
gcggaacgtgtgcgtcaggaagagcatatagaattgatcgcctcagagaactacacctcg
ccgcgcgttatggaggcccaggggtctcagctgaccaataaatatgccgaaggttatccc
ggtaagcgttattacggcggttgtgaacacgtcgatgtggtcgagcaactggccatcgat
cgggccaaagagctgtttggcgcggaatttgccaacgtccagcctcactccggttcacag
gccaatggcgcggtctatatggccctgtgtaagcctggcgatactatcctcggcatgagt
ctggcgcacggtggtcacctgacccacggtgcatcagtgtccttctctggccgaatctac
aacgcggttcagtacggtctgaataccgataccggtgaaatcgattacgaccaggttgac
gctctagcccgtgagcataagccaaagatgatcgtagccggcttttcagcttactcactg
atcgtcgactgggcgcgttttcgtgccattgccgacgaagtgggtgccttcctgttcgtc
gacatggcgcacattgccggcctagtcgcggcgggtgtctacccgagcccgatgccgttc
gccgatgtggtcaccaccaccacccataaaacattgggcggcccgcgcggcggcctgatc
ctggcgcacaacgatgaggctttgaacaagaagttgaactttgccgtcttccctgaaagt
cagggcggcccgttgatgcacgttattgccggcaaggccgtctgctttaaagaagcaatg
gagcctgaattcaagctgtatcaagcccaggtggttaagaatgccaaggcgatggcggcg
gcctttatggcgcgcggtatccgcattgtctccaacggcactgaagatcacttgtttttg
gtcgatttgatcggcaaatcttactcgggcaaagacgctgatgcggccttgggtttggcg
aacattaccgtcaacaagaactcggtacccaatgatccgcgctcaccttttgtaacctcg
ggtctgcgcattggtacgccatcgatcacgcgccgcggttttaatgaggccgaagcgacc
cagttgaccaattggatctgtgatgtgctggatgcgctggaaacgggcaacgccgatgcg
atgatcgctgaagtcaaagccaaggtgattgcgatctgcgcttccttgccagtctatcgc
taa
DBGET
integrated database retrieval system